Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0527 ATGAGTTGCAATGGTTGTCGTGTCCTTAGAAAAGGTTGCAGCGATGATTGCATGCTAAGACATTGTTTCTTGTGGATAGAGAATCCACAAGCACAGGCTCACGCCACCCTCTTTGTTGCCAAGTTCTTTGGCCGTGCCACCCTCATGTCTTTCATTTCTTCTGTACCCACCAATCAAAGATCTGCATTGTTTGAGTCACTTGTGTATGAAGCAGTGGGACGCACTATAAATCCAGTGAATGGAGTAGTAGGGTTGCTTTGGAGTGGAAACTGGCACTTGTGTCAATTGGGTGTAGAGAAAGTGCTCAAAGGTGGAAGCCTTTTGAACCCTAACCCTCATCATCATGATGAAGAAGAGGTTGAGAGAGTTATGGTTAGTCATCAAGCATCTCAGGAAGAATCTGAGACCACCACATTTGGAAGTAGCACCCCACAGGTTGATTCTGATTCTCATCAAAAAACTCAAAGGAGGAAGCTTCTTACACTATTCTTCTGA 495 0.4424 MSCNGCRVLRKGCSDDCMLRHCFLWIENPQAQAHATLFVAKFFGRATLMSFISSVPTNQRSALFESLVYEAVGRTINPVNGVVGLLWSGNWHLCQLGVEKVLKGGSLLNPNPHHHDEEEVERVMVSHQASQEESETTTFGSSTPQVDSDSHQKTQRRKLLTLFF* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0527 164 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Lan8g0527 164 MobiDBLite consensus disorder prediction 126 153 - -
Lan8g0527 164 MobiDBLite consensus disorder prediction 129 149 - -
Lan8g0527 164 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 164 - -
Lan8g0527 164 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Lan8g0527 164 PANTHER LOB DOMAIN PROTEIN 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0527 Lan-Chr8 7510423 7511874 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0527 1 139 AS2 family AT3G49940 55.921 1.21e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan8g0527 LOB 3.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0527 - - gmx:100816269 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0252 18 3246132 3247587 Lan8g0527 8 7510423 7511874 PCT
Lan6g0261 6 1942198 1943327 Lan8g0527 8 7510423 7511874 PCT