Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan8g0514 | ATGATGATCAAGGAAGATGAAACAACTTTTACAACAGCCAAGGAACAACCAAGGGAAGTGATGACCAGAGACAAGAACACTGATGGAAGCGAAGGTGACAATCAAGAAGAGTGGCTGAATTTGAGCTTAGGAGGCACATCACGCTCGGAGGGAGATACTGATTCACAGTCAAGACCAGCTACAACCAAAGTTTTTCCATGCAACTTCTGCATGAGGAAGTTCTTTAGTTCACAAGCATTAGGAGGTCATCAGAACGCCCACAAAAGGGAGAGAAGTGCTGTCAAAAGATATCAGTCCCAGAAGACGATGACAATGATGGGATTTTCCATAAACAATCCTATGCTTCGATCCCTCGGTGTCCAGCCCCATGCAATCGTTCACAAACCAAGCAGAGGTGGTGGAACTATGATGGCACCAAGCTTTCATGATGCATATGCAATGGCATGTACACCTTTCATGTTTGAGGAAAAAACTGATCTGGCATGGCCAGGCAGCTTTCGTTTCGTTCCACAACGATCTGAGCCACCACAGGAGTCACTCAAGCTTGATTTAAACCTCAGACTTTGA | 567 | 0.4533 | MMIKEDETTFTTAKEQPREVMTRDKNTDGSEGDNQEEWLNLSLGGTSRSEGDTDSQSRPATTKVFPCNFCMRKFFSSQALGGHQNAHKRERSAVKRYQSQKTMTMMGFSINNPMLRSLGVQPHAIVHKPSRGGGTMMAPSFHDAYAMACTPFMFEEKTDLAWPGSFRFVPQRSEPPQESLKLDLNLRL* | 189 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan8g0514 | 188 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 65 | 92 | IPR013087 | - | |
Lan8g0514 | 188 | SUPERFAMILY | beta-beta-alpha zinc fingers | 62 | 92 | IPR036236 | - | |
Lan8g0514 | 188 | PANTHER | ZINC FINGER PROTEIN 4-LIKE | 5 | 188 | - | - | |
Lan8g0514 | 188 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Lan8g0514 | 188 | Gene3D | Classic Zinc Finger | 49 | 111 | - | - | |
Lan8g0514 | 188 | PANTHER | ZINC FINGER PROTEIN 4-LIKE | 5 | 188 | - | - | |
Lan8g0514 | 188 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
Lan8g0514 | 188 | MobiDBLite | consensus disorder prediction | 33 | 60 | - | - | |
Lan8g0514 | 188 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 67 | 87 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan8g0514 | Lan-Chr8 | 7423806 | 7425315 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan8g0514 | 26 | 185 | C2H2 Transcription Factor Family | AT1G24625 | 36.686 | 8.34e-23 | 89.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan8g0514 | - | - | gmx:100811125 | 253.447 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan8g0514 | 8 | 7423806 | 7425315 | Lan20g0408 | 20 | 2838697 | 2840200 | LSH | |
Lan8g0514 | 8 | 7423806 | 7425315 | Lan4g1498 | 4 | 24107620 | 24108824 | LSH |