Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0514 ATGATGATCAAGGAAGATGAAACAACTTTTACAACAGCCAAGGAACAACCAAGGGAAGTGATGACCAGAGACAAGAACACTGATGGAAGCGAAGGTGACAATCAAGAAGAGTGGCTGAATTTGAGCTTAGGAGGCACATCACGCTCGGAGGGAGATACTGATTCACAGTCAAGACCAGCTACAACCAAAGTTTTTCCATGCAACTTCTGCATGAGGAAGTTCTTTAGTTCACAAGCATTAGGAGGTCATCAGAACGCCCACAAAAGGGAGAGAAGTGCTGTCAAAAGATATCAGTCCCAGAAGACGATGACAATGATGGGATTTTCCATAAACAATCCTATGCTTCGATCCCTCGGTGTCCAGCCCCATGCAATCGTTCACAAACCAAGCAGAGGTGGTGGAACTATGATGGCACCAAGCTTTCATGATGCATATGCAATGGCATGTACACCTTTCATGTTTGAGGAAAAAACTGATCTGGCATGGCCAGGCAGCTTTCGTTTCGTTCCACAACGATCTGAGCCACCACAGGAGTCACTCAAGCTTGATTTAAACCTCAGACTTTGA 567 0.4533 MMIKEDETTFTTAKEQPREVMTRDKNTDGSEGDNQEEWLNLSLGGTSRSEGDTDSQSRPATTKVFPCNFCMRKFFSSQALGGHQNAHKRERSAVKRYQSQKTMTMMGFSINNPMLRSLGVQPHAIVHKPSRGGGTMMAPSFHDAYAMACTPFMFEEKTDLAWPGSFRFVPQRSEPPQESLKLDLNLRL* 189
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0514 188 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 92 IPR013087 -
Lan8g0514 188 SUPERFAMILY beta-beta-alpha zinc fingers 62 92 IPR036236 -
Lan8g0514 188 PANTHER ZINC FINGER PROTEIN 4-LIKE 5 188 - -
Lan8g0514 188 MobiDBLite consensus disorder prediction 1 32 - -
Lan8g0514 188 Gene3D Classic Zinc Finger 49 111 - -
Lan8g0514 188 PANTHER ZINC FINGER PROTEIN 4-LIKE 5 188 - -
Lan8g0514 188 MobiDBLite consensus disorder prediction 1 60 - -
Lan8g0514 188 MobiDBLite consensus disorder prediction 33 60 - -
Lan8g0514 188 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan8g0514 Lan-Chr8 7423806 7425315 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0514 26 185 C2H2 Transcription Factor Family AT1G24625 36.686 8.34e-23 89.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0514 - - gmx:100811125 253.447
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0514 8 7423806 7425315 Lan20g0408 20 2838697 2840200 LSH
Lan8g0514 8 7423806 7425315 Lan4g1498 4 24107620 24108824 LSH