Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0508 ATGGGAAAGCGAATTCGGGAAAAACAGTCTGCAATGCCTCATGGAAATGATACTCATCCGGGACGAGTTTGGGGAATTCTTCATGTTATAAAGTATCATCACTGGAGACATGTCAAGAGAAGGCTTACACACAAGAAGCATGGTGGTGGTGAAAGAAATGATGCAAGTCATAGAGATGGAATTCCAGAGAATGTTGATGATTCTGTTCATGATATGTCTGTGCATTATGAGCCAAATACAACATTATCTAATGCTGAAGAAAATCTAGAATACTCCACTCTACCAGCGAAAAGTTCTATCAAATCCCGACTAAAAGCGTTTATTCAGGACGAGATGACCAGAAAGAAGTGCAGACATAAAAGAAGTTCAACATGTCCAACAAAGTCACAGCTAACGCGCGCCGATTCCATTCATCACTTGGAGGTTGATCCACTTACTGAATTGTTATTAACTGGTGAAAGTCCTGAACCGGTTCTAGAAACCTTTCAAAACCATCATGCTTCTGGTACATTTGAAGCATCGTCACCAGTTTTCTCAAATAAAGCAGTTACCAATAATGAGAAATGTGTAGATTGTGGTACCATGTTTTCTAGTGACATATTGGAGCAAAACATGGATCATAAGCATCACAAGCAATGCACAGATACAAGCAATTTAGCCTCTCCTAATGAAAGTGACCCAGAAGAGAAGTTGATAAATGCAAAGATTCTTACAAATGATGTTTCACCTCACCTTTTCAAGGATTTTCTTGATGCTTTGGATATAATTAACACAAACAAAGACTACTTATTGAATTATATACAGGATCCAGGTTCTCCTTTGCCATTTAATTCTCATAATGAACTGAAATTCAGTGGCAAAAGAAGATCCAACTCTATCTCTTTTCCGGTATTTACTGCATTATCAGGAACCAAAGATTCTGAGTCTGACCAACTCATAAACCAAATGGTAGATGAGTGTTTCGACGAAAAAGGGGAGAATAAAAAATCATCCATGTTTGATTTTATTGAAGATTATCGTCCGCTGTCTCGACCGTCACCCGCTGCCTCCTCATCAGTTTCATCCCAGGTTCCCAGCCATGTGAAAACTAATCATTTCAAGGATCTTCGGATGAAGATAAAGCAGCTAATCGATGAAAACAAAAATGAAAAGTTACGCATTACTATGGACGCAGTCATTGACAAGATTCCACGCGGAAGTAGTGTCTCAAAAAATGTAAAGAAGTTGATCCATGACAAATTCAAAGACAATGGAGAAGGAAAAGACAGTGCAGGGAGTGGTTTTGAAAGAAGTCTCTCTTTTAATTCCTTCAAGAAGCGTCAACAATCGATGAGAACTTCATCTCTGAAGGAATCAGCTAGAAGATATTCACAGCTGTATGAGACTTGTTTTAACACTGATATCAAGTACCCTAAGCCTGAAAAGTTAAAGTTGAAAGCAGAAGAGAAAACTTCAATATTGAAGACCCCAAAATCCTTTAAAAGGTTTCTTTCATTACCTAATCTAAAATCATATTTCCATCAGATTGAGGAGCCTTCTATTTCTTCATCCCCTCAATGTTCAACTACGCAATTCGGCGAGAAAATCAGAAGCACAAGTTTTAAAGATGAGAAGAGGAGTTTTGACCATGGTGATGATTTAAAGAGTCATATTCTGCCACTTACCTTTGCTGATAACACAATTCCTGAAAGCATCTTGAATGCTGATCAAAAGAACCTTCTTGTTAGAAGTGCTTCAAAATCAGGATTAGATGTTATTAATGAAGGAAAGGATGATACAAACATAACAATTGATGTATTAGAGAATTTCAGAGATAGTGATATAGCTGCTATGCCTATAGATGCAAACCCAATCTTCTCTTCTGACACTAGCTTCCTCGATGCCACGTTCGAGTTCGATAAGTTAAACCTAATGGAAGATTCCGAACTACAACCAGGGCCAGCTGATGAAGTTGATGAGCAACAAGAGCCTGAAGTGTATGAAACTGAGATGGTTGAGAGTGTAGATAATTTTCATAAAATTGGAACTTTAAGCAAGGGCTTCAACTATGAAATTCCATGCATTGAAGTAAAAGAAAGTCATAAAGCTACATTTAATTATGTGAGAAAGGTTTTAGAGCTTTCTGGATTCACAGGCCATGAATCATTTGGAATATGGTATTCTGATAACCAACCAGTTGACCCTTCAATATATGAAGAATTAGAAGGGTGCTTGCTTCTTGATCCAGATTGTTCAGGTAATTGTGATGAAGATGGACAATGCAATCATCTACTTTTGTTTGATATAATCAATGAGGGATTATTAGAGATTTTTGGAAGATCTTATAGCTATTATCCAAGACCCTTGTCTTATCTTTCACATGTTCATCCATTGCCATCAGGGGACAATGTTCTCCATAAAGTTTGGAACCTTATTAGTTGGTATCTTAACTCACCATCACCTCAAGTTTATCCATCACTGGATTACTATGTGAGCATAGATTTAGCCAAAAATGATGGGTGGATGAATCTACAATTTGATTCTGAATGTGTGGGGCTTGAGTTAGATGACTTGATTTTTGATGATCTTTTGGATGAAATTATCTTCACTTCGGCATAA 2598 0.3737 MGKRIREKQSAMPHGNDTHPGRVWGILHVIKYHHWRHVKRRLTHKKHGGGERNDASHRDGIPENVDDSVHDMSVHYEPNTTLSNAEENLEYSTLPAKSSIKSRLKAFIQDEMTRKKCRHKRSSTCPTKSQLTRADSIHHLEVDPLTELLLTGESPEPVLETFQNHHASGTFEASSPVFSNKAVTNNEKCVDCGTMFSSDILEQNMDHKHHKQCTDTSNLASPNESDPEEKLINAKILTNDVSPHLFKDFLDALDIINTNKDYLLNYIQDPGSPLPFNSHNELKFSGKRRSNSISFPVFTALSGTKDSESDQLINQMVDECFDEKGENKKSSMFDFIEDYRPLSRPSPAASSSVSSQVPSHVKTNHFKDLRMKIKQLIDENKNEKLRITMDAVIDKIPRGSSVSKNVKKLIHDKFKDNGEGKDSAGSGFERSLSFNSFKKRQQSMRTSSLKESARRYSQLYETCFNTDIKYPKPEKLKLKAEEKTSILKTPKSFKRFLSLPNLKSYFHQIEEPSISSSPQCSTTQFGEKIRSTSFKDEKRSFDHGDDLKSHILPLTFADNTIPESILNADQKNLLVRSASKSGLDVINEGKDDTNITIDVLENFRDSDIAAMPIDANPIFSSDTSFLDATFEFDKLNLMEDSELQPGPADEVDEQQEPEVYETEMVESVDNFHKIGTLSKGFNYEIPCIEVKESHKATFNYVRKVLELSGFTGHESFGIWYSDNQPVDPSIYEELEGCLLLDPDCSGNCDEDGQCNHLLLFDIINEGLLEIFGRSYSYYPRPLSYLSHVHPLPSGDNVLHKVWNLISWYLNSPSPQVYPSLDYYVSIDLAKNDGWMNLQFDSECVGLELDDLIFDDLLDEIIFTSA* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0508 865 Pfam Domain of unknown function (DUF4378) 698 859 IPR025486 -
Lan8g0508 865 MobiDBLite consensus disorder prediction 1 20 - -
Lan8g0508 865 MobiDBLite consensus disorder prediction 47 67 - -
Lan8g0508 865 PANTHER PROTEIN TRM32 1 863 IPR044257 -
Lan8g0508 865 Coils Coil 366 386 - -
Lan8g0508 865 Pfam Protein of unknown function (DUF3741) 229 272 IPR022212 -
Lan8g0508 865 MobiDBLite consensus disorder prediction 42 67 - -
Lan8g0508 865 PANTHER TRM32-LIKE PROTEIN (DUF3741) 1 863 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0508 Lan-Chr8 7341115 7345227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0508 239 853 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 34.400 3.48e-85 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0508 - - lang:109326185 1345.1