Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0471 ATGATGATGGTTCTGCTGCTACATGTGTTTTGCTTGCTCTTGTTTTCAAGTCCTATACAATTGGTGTCAGCTAGAAAATGTTTACCTGCACTTAACTGTGGAGATCTCGGCAACATCAGTTTCCCTTTCACGGACACACGACGCCCGGACTGTGGCATATTGATTATACATGGTTGTGATGATCCTGAACCTGATATCACAAAATCTATAAAGAACAACAACAAATGGTTTGATGTTGTCAAGATTCAACATAATACGATTAAAATTACAGACAATGATCTCCGCCAACTCTTGATGACAAAAAGTTGTGATGTCTTCAATTATGATTCAGCTTTCACTGTCAGCTCACCTTTTGCTTCTTCTCAAACAGATTATTATTCAAACCTTCTCACATGCAATCACACCCTTGATCCTCAGAACTACAATTTTGCTTATAATTCTACAGGATGTGGAAACGCTACTTTCTATGACATCGGAAAGGCCAACAATCGTTTCATAGGTTGCTCAATGGTTCAGCTTCCAGTGACCTATCTTAGTGGTTCTAGTGACCTTTTCGATGTGATAACTTATGATGTCCAATTTGAAATAGATTTGACTCCAGATTGTTTAACTTGTCACGATGTTCATGAAGGCCAATGTCGAGTTGATAGCAGTGGAAGGTTTTATTGTGACCAAGGAAATAGGGCAAAGATCTATCACATAGTGGCACCAGTTGCATCTGTTGTTGGAGCACTAGGAGTGCTGATAGTCTTGGCTTGGTGCTTTAGAAGACGCATTTTCAACAAGGAAAACCCAACCCACCAAATAATTGAGATGTTTCTGAAAGATCATGGTCACCTTGCAGCCAAAAGATACAGTTATTTGGAGATAAAGAAGGCGACCAACTCGTTCAGAAACAAATTAGGTAAAGGAGGATATGGTAGTGTATACAAAGGGAAGTTACATGATGGAAGTCTTGTGGCAGTAAAGGTGTTAAGTGAGTCCAAAGGTAATGGTGAAGAATTCATCAATGAAGTTGCTAGTATCAGTGTTACTTCTCATGTTAATATTGTTACTTTATTGGGATTCTGTTTAGAAGGTTCTAAAAGAGCTCTCATATATAAATATATGCCTAATGGATCAGTTGAGAAGTTCATATATAAAGTTAAGGAACCATCAAATATCAATCTTCATTTGACTTGCAAGGCCATCTTTAACATTGCTCTTGGCGTTGCTCGAGGATTAGAGTATCTGCACAAGGGTTGCAACACAAAAATTGTGCATTTCGATATAAAACCACACAACATATTGTTGGATGAGGATTTTTGTCCAAAGATTTCAGATTTTGGACTTGCAAAAATATGTAATAGACAAGAAAGTATTGTGTCCCTAGTGGGAACTAGGGGAACTGCAGGCTATATTGCTCCAGAAGTGTTCTCTAGAAATTTTGGTGGAGTCTCTCATAAATCTGATGTATACAGTTATGGAATGATGGTTTTAGAAATGGTTGGGGGAAGAAACAATGTGAATGTTGAAGTTGAAGATGTAGATGAATGTTCAAGTGATTTATATTTTCCACATTGGATTTACAAGCGTCTCGAACTGAATCAGGATCCGGGATTGCAGATTGTTGAAAGCGAAAGCGATAAAGAAATGGTACTAAAGATGATCATAGTGAGCTTATGGTGCATACAAACTGATCCATCAAATAGACCAACAATAAGCAAAGTGGTAGATATGATGGAAGGAAGCTTGGAATCCTTGCAAATACCACCCAAGCCTTACCTCTGTTCACCTCTCAGATCTACCTCAGGTTCAATAGATCACCTTACTGAGACATGTCAAACTTCATATCCTTCAGAGTGTTAA 1848 0.382 MMMVLLLHVFCLLLFSSPIQLVSARKCLPALNCGDLGNISFPFTDTRRPDCGILIIHGCDDPEPDITKSIKNNNKWFDVVKIQHNTIKITDNDLRQLLMTKSCDVFNYDSAFTVSSPFASSQTDYYSNLLTCNHTLDPQNYNFAYNSTGCGNATFYDIGKANNRFIGCSMVQLPVTYLSGSSDLFDVITYDVQFEIDLTPDCLTCHDVHEGQCRVDSSGRFYCDQGNRAKIYHIVAPVASVVGALGVLIVLAWCFRRRIFNKENPTHQIIEMFLKDHGHLAAKRYSYLEIKKATNSFRNKLGKGGYGSVYKGKLHDGSLVAVKVLSESKGNGEEFINEVASISVTSHVNIVTLLGFCLEGSKRALIYKYMPNGSVEKFIYKVKEPSNINLHLTCKAIFNIALGVARGLEYLHKGCNTKIVHFDIKPHNILLDEDFCPKISDFGLAKICNRQESIVSLVGTRGTAGYIAPEVFSRNFGGVSHKSDVYSYGMMVLEMVGGRNNVNVEVEDVDECSSDLYFPHWIYKRLELNQDPGLQIVESESDKEMVLKMIIVSLWCIQTDPSNRPTISKVVDMMEGSLESLQIPPKPYLCSPLRSTSGSIDHLTETCQTSYPSEC* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0471 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Lan8g0471 615 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 33 614 - -
Lan8g0471 615 ProSiteProfiles Protein kinase domain profile. 295 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0471 615 Gene3D Phosphorylase Kinase; domain 1 272 369 - -
Lan8g0471 615 PANTHER RUST RESISTANCE KINASE LR10-RELATED 33 614 IPR045874 GO:0004672
Lan8g0471 615 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Lan8g0471 615 Pfam Protein kinase domain 299 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0471 615 Gene3D Transferase(Phosphotransferase) domain 1 370 583 - -
Lan8g0471 615 SUPERFAMILY Protein kinase-like (PK-like) 279 574 IPR011009 -
Lan8g0471 615 SMART serkin_6 295 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0471 Lan-Chr8 6975062 6978016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0471 9 597 Receptor kinase-like Gene Family AT5G38260 39.389 1.56e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lan8g0471 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0471 - - gmx:100785979 785.023