Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0469 ATGGGTTCGAATATAGAAGGACCATCTACCCCATCAAATCGACGTGATCCTTATGAGGTTTTATCTGTCACAAGGGACTCTACTGATCAAGAAATCAAAACCGCTTACAGAAAGCTAGCTCTCAAGTATCACCCGGACAAGAATGCCAGCAATCCTGAAGCTTCAGAACTATTTAAGGAGGTTGCATATTCTTATAGTATCTTGTCTGACCCAGAGAAGAGAAGGCAGTATAACAGTGCAGGATTTGAGGCACTTGATGCTGATAGCATGGACGTGGAAATTGACTTATCTAATCTTGGGACTGTCAACACAATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTTCCTATCAAGACTACTATTTCGGCTAATGTACTTGAAGAAGCTCTGAATGGCACTGTTACAGTCAGACCCCTTCCGATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAGTGTGCTCATTTTTTTGGTGTGACAATAAATGAGCAGCAAGCACAGTCAGGGATTGTAATAAGAGCTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACATGATGCAAATGGTGGCTATGGTTTAGCATTACAGGAAGACAGCGAGAAGACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGATTCAACTGTAAACGCGTTAGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGAACTAAAGCCCGGCACTCATATCTTTGCTGTTTATGGGGATAACTTCTTTAAGACTGCTAGCTATACAATTGAGGCAGTATGTGCACAATCACATGAAGATACCACCCAAAAGCTTATGGACATTGAGGCTCAAATTTTAAGAAAGAGGAATGAGCTACACCAATTTGAAGCAGAATATAGAAAGGCAGTGGCACGCTATCAGGAAGTGACAGATAGATACACAATAGAAAAACAGTCTGTAGATGAGCTTCTGAAACAAAGGGACAATATTCATTCTTCCTTCACCATTGTCAAATCAAGCATTATTAGTGGGAGTACTAGTAATTTAAGCAATGGAAGTTCTAGCAAAATTTCCGGTGAAGGAAGCCCTGAGGATGGTGGGTCAGATGGAAAGGATAAATCCGGCAAAAAGAAATGGTTTAACCTCAAATCTTAA 1200 0.41 MGSNIEGPSTPSNRRDPYEVLSVTRDSTDQEIKTAYRKLALKYHPDKNASNPEASELFKEVAYSYSILSDPEKRRQYNSAGFEALDADSMDVEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEQQAQSGIVIRATSTAQSKFKLLYFEHDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEGAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEAVCAQSHEDTTQKLMDIEAQILRKRNELHQFEAEYRKAVARYQEVTDRYTIEKQSVDELLKQRDNIHSSFTIVKSSIISGSTSNLSNGSSSKISGEGSPEDGGSDGKDKSGKKKWFNLKS* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0469 399 ProSiteProfiles dnaJ domain profile. 16 81 IPR001623 -
Lan8g0469 399 SUPERFAMILY Chaperone J-domain 12 85 IPR036869 -
Lan8g0469 399 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 2 398 - -
Lan8g0469 399 Pfam DnaJ domain 16 78 IPR001623 -
Lan8g0469 399 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Lan8g0469 399 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 2 398 - -
Lan8g0469 399 CDD DnaJ 16 70 IPR001623 -
Lan8g0469 399 Gene3D DnaJ domain 4 97 IPR036869 -
Lan8g0469 399 SMART dnaj_3 15 73 IPR001623 -
Lan8g0469 399 MobiDBLite consensus disorder prediction 360 399 - -
Lan8g0469 399 PRINTS DnaJ domain signature 18 36 IPR001623 -
Lan8g0469 399 PRINTS DnaJ domain signature 36 51 IPR001623 -
Lan8g0469 399 PRINTS DnaJ domain signature 53 73 IPR001623 -
Lan8g0469 399 PRINTS DnaJ domain signature 73 92 IPR001623 -
Lan8g0469 399 MobiDBLite consensus disorder prediction 380 399 - -
Lan8g0469 399 MobiDBLite consensus disorder prediction 360 376 - -
Lan8g0469 399 Coils Coil 286 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0469 Lan-Chr8 6962379 6968524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0469 9 88 C2H2 Transcription Factor Family AT1G74250 41.176 1.46e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0469 - - lang:109336585 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0469 8 6962379 6968524 Lan20g0452 20 3189872 3195491 LSH
Lan8g0469 8 6962379 6968524 Lan4g1446 4 23603711 23609406 LSH