Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0462 ATGACACTTTCTATTTTCTCTTCCCATTGCCACCACCATCACCGTATCAAACTAAACCATTCTCTACTCACATTTTTTACTACTTCAACTCCTTCTCCAAGAACTAAAGTCCGGTTCCCACGAATGGATGCTGCAGCCGCTACCACGTTCCACCACCACCGCCGGAAAGATAAGGTGGTCGTCATTATGGGCGCCACCGGTTCAGGAAAATCGCGACTTTCCGTCGACCTAGCTACCCTTTTCTTCCCTTTCTCCGAAATCCTCAACTCTGATAAAATGCAAGTATATTCCGGCCTCGATATTACTACCAACAAGATCCCTCTCCACCAGCGCCGCGGTGTCACACACCACCTCCTCGGCGATGTCGACCCCTCCGGCGGTGAGTTCTCCCCTTCGGACTTCCGCCACCACGCCGGAGAAATAATCTCCGATGTTACCAACAGAAGAAAACTACCCATCATAGTTGGTGGTTCTAACTCCTTCATCCACGCTCTTCTGGTTGAACGATTCGACCCCGAGTTGAACGTGTTTGATACTGAATCATCGTCGTCATCACTCGTTATTTCTTCAGAGTTGAGATATAACTGTTGCTTCCTCTGGGTAGATGTGTCATTTTCTGTTTTATCAGAGTATTTGATAAAGCGAGTTGATGACATGCTTGACTCGGGAATGGTAGACGAGTTGGCTCAGTTCTTCGACCCGAATGCGACCGAAGAAATGAACCGAACCGGGTTGAGGAAAGCGATTGGAGTACCAGAGTTGGACCGGTTTTTTAAAGAACATCCTCCCGGTTCGATAAAGGATGAGGATCGTGTGTGGAAGGGTGCATACAAGGAAGCAGTGAGGGCGATTAAGGATAACACGTGTAAGCTGTCGAAGAACCAGATAAGGAAGATTTTAAGGCTGAAAAGGGCAGGGTGGGACCTACAGAGGGTTGACGCCACCGCGGCATTTACGGCGGCGCTGACGTCAGATGATAGTTGGTCCGATATATGGGAGAGGAATGTGTTGGAACCAAGCGTCAAGATTGTGAACCGCTTTTTGATGGAGTAG 1053 0.4872 MTLSIFSSHCHHHHRIKLNHSLLTFFTTSTPSPRTKVRFPRMDAAAATTFHHHRRKDKVVVIMGATGSGKSRLSVDLATLFFPFSEILNSDKMQVYSGLDITTNKIPLHQRRGVTHHLLGDVDPSGGEFSPSDFRHHAGEIISDVTNRRKLPIIVGGSNSFIHALLVERFDPELNVFDTESSSSSLVISSELRYNCCFLWVDVSFSVLSEYLIKRVDDMLDSGMVDELAQFFDPNATEEMNRTGLRKAIGVPELDRFFKEHPPGSIKDEDRVWKGAYKEAVRAIKDNTCKLSKNQIRKILRLKRAGWDLQRVDATAAFTAALTSDDSWSDIWERNVLEPSVKIVNRFLME* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0462 350 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 47 349 - -
Lan8g0462 350 Pfam IPP transferase 94 170 - -
Lan8g0462 350 Pfam IPP transferase 189 297 - -
Lan8g0462 350 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 47 349 IPR039657 -
Lan8g0462 350 Gene3D - 56 348 IPR027417 -
Lan8g0462 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 237 IPR027417 -
Lan8g0462 350 CDD ABC_ATPase 55 128 - -
Lan8g0462 350 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 205 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0462 Lan-Chr8 6905665 6907047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0462 193 348 C2H2 Transcription Factor Family AT2G27760 30.000 1.38e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0462 K10760 - gmx:100813761 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0462 8 6905665 6907047 Lan20g0458 20 3277918 3280004 LSH