Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan8g0455 | ATGTCTAAGCCTCGAAAACAAACGGCAAATAGACAGAAACAAAGGACACATACCTTTCAAGAGCCCAAGATTATGAGAAAACTTAGGATAATTTTCAACGACCCTGATGCTACTGATTCATCTGATGATGAATTTGAGCCTAGAAAAATCAAAAGATGCATTCGTGAAGTACCACTTCCTCTTACTTCAGCCACCGACTCTACCACCACATTTACTGAAACAACAATCTCTTGTGATGAAAGAAACAAAAGTGTTGGTGGGGTTTTGAGCAAGTCTTGCATTGAAGGTCAACAACAACCCCAAACCAATAAAAGGAAAAGGGTTTTGAAACAAAACCCTTCAAGTAAGTTACTACCTATTGGAAAATATAGAGGAGTGAGGCAAAGAAAATGGGGTAAATGGGCTGCAGAAATCCGTGACCCGTTTAGAAGTACCCGTCTTTGGTTAGGTACTTACAATACAGCTGAAGAAGCTTCACAGGCCTATGAGAACAAAAGGCTTGAATTTGAAGCTATGGCAAAGGCTCAATCTTGCAACAATGGTTGTTATTCTTCTGCTTCTTCTGTTGTAGTACCTAAGCCTGCAGCTACTACTGCTACAGATAAGAGTAACTACACTGCAGTGGAATCTGTATCAGAGAAATCTTCTAGTTCTACTACTATGGAAGATTCTGAGAGCATGTTGTCACATACATCACCATCTTCTGTGCTTGACTTGGATACTTCAGGTTCTAATTTGATTGACAAGGGTAATGTTTCATGCAATGAAGCTGTTGAGGCTTGTGATTTTGTGGCTGAGTTAGCTGAACTGGAGATACCAGATTTGAGCACTTTGAACTTGCCTCCTCTTTCAACATATAATGCTGCTGAATCTGGTGCTGATTCTGAGCCAAACCATGGGCTTGATTTTGATTTGTTGCAATTTGATTATGCAAATGGCTTTAATGATTTTGGTGGCTTGGAAGATTTCCATATCTTTGGATTTGATGATAAGGAACCTAGTGTGCTTCCTGATTTTGATTTTGGTGATTTCATTGCTGATGAATTTGCTGGTTGGATTGAGGATCCTCTCAATGCAACTTTCGTCTAA | 1089 | 0.3958 | MSKPRKQTANRQKQRTHTFQEPKIMRKLRIIFNDPDATDSSDDEFEPRKIKRCIREVPLPLTSATDSTTTFTETTISCDERNKSVGGVLSKSCIEGQQQPQTNKRKRVLKQNPSSKLLPIGKYRGVRQRKWGKWAAEIRDPFRSTRLWLGTYNTAEEASQAYENKRLEFEAMAKAQSCNNGCYSSASSVVVPKPAATTATDKSNYTAVESVSEKSSSSTTMEDSESMLSHTSPSSVLDLDTSGSNLIDKGNVSCNEAVEACDFVAELAELEIPDLSTLNLPPLSTYNAAESGADSEPNHGLDFDLLQFDYANGFNDFGGLEDFHIFGFDDKEPSVLPDFDFGDFIADEFAGWIEDPLNATFV* | 363 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan8g0455 | 362 | Gene3D | AP2/ERF domain | 122 | 178 | IPR036955 | GO:0003700|GO:0006355 | |
Lan8g0455 | 362 | PRINTS | Ethylene responsive element binding protein signature | 123 | 134 | IPR001471 | GO:0003700|GO:0006355 | |
Lan8g0455 | 362 | PRINTS | Ethylene responsive element binding protein signature | 145 | 161 | IPR001471 | GO:0003700|GO:0006355 | |
Lan8g0455 | 362 | MobiDBLite | consensus disorder prediction | 196 | 236 | - | - | |
Lan8g0455 | 362 | SMART | rav1_2 | 122 | 176 | IPR001471 | GO:0003700|GO:0006355 | |
Lan8g0455 | 362 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 9 | 359 | - | - | |
Lan8g0455 | 362 | ProSiteProfiles | AP2/ERF domain profile. | 122 | 181 | IPR001471 | GO:0003700|GO:0006355 | |
Lan8g0455 | 362 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 | 9 | 359 | - | - | |
Lan8g0455 | 362 | SUPERFAMILY | DNA-binding domain | 122 | 169 | IPR016177 | GO:0003677 | |
Lan8g0455 | 362 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Lan8g0455 | 362 | CDD | AP2 | 122 | 162 | IPR001471 | GO:0003700|GO:0006355 | |
Lan8g0455 | 362 | Pfam | AP2 domain | 122 | 171 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan8g0455 | Lan-Chr8 | 6747992 | 6750315 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan8g0455 | 20 | 358 | AP2-EREBP Transcription Factor Family | AT1G68550 | 33.424 | 1.38e-37 | 135 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Lan8g0455 | AP2 | 3.5e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan8g0455 | - | - | lang:109336607 | 483.026 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan8g0455 | 8 | 6747992 | 6750315 | Lan20g0470 | 20 | 3414440 | 3416960 | LSH | |
Lan8g0455 | 8 | 6747992 | 6750315 | Lan4g1431 | 4 | 23359013 | 23360939 | LSH |