Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0450 ATGGCGTCGCTGACGGCGTCGTTTCGTTATATGAGCTGGGAGGAAGTGTTGGTTTCGAGTGAGAAGAGAAGAAGAGTGGTTCATTATTTTCTGAAGAAAAAAGATGGAAGTTCAGATCTGGCGGTGGTAGCTAAAGAGAAGAATTTTAGACACTTCTCTTATCACTGTGTGCTTCCTTCAATCGATGCTTCGTTCACTCTCTTTAATCCGAAATCTCGAAGAGATCTTGTTCTTTGGTTGGATTCTCTTGTTTCAGATTGGTCTGCTGAGGATGTATCTCATGCTGCCGAGGCTGCAGCCTTGAAGGATGATCAGTTGCGGAAGCTGAGCCATGGCACAAAGGAGTTCTTGTGGTTAGGATCTCCTTGGACGTGCAGGAAAAGAAGAAAGCACTACCAATCATTCCGAAGGAATGGTTTTAAGATATCTGTTTATGATTTTGTGTGTGTTTTAGCAGAAGACAAAAGTCTCGTTGCATACTTGGAAGACATGTATGAGGATTCCGATGGCAATAAGATGGTTGTGGTACGTTGGTTTTACAAAATTCATGATGTTGGCATTGTTGTGCCTGGCAGTTTTTGTGACAGAGATGTTTTCTTTTCTCGTTATCTTCAAGATCTGAGTATTGAATGCATAGATGGATTGGCTACTGTCCTCAACCCCCAGCATTATGAGACATTTCAGAATGAGGCTAGACACACTCGCTTGGAACCCTTCATATGTGGCAATCAATTTGATAACAATGCTTTGAAACCCTTTGATGTAACTCAACTTCGGGGTTACTGGAAACAGGAAATAATAAGATATATGTATACCTTTTTTGACTCAAAGTCCAATGGGAGTTCTGGGCAATCTGATGATAGCCAAGAGAGTCTCCAACATAATGCTTCACTCAGATATACGAAGAGGCTGCGCTCTATAAAAATTGATCGTAAAAATGTGGTTGATATAGCTGCTGATAAATTACAAAATTTGAGTGATACTAGGACTGATACAAAAGCCGGTATGGTAAGCTGCTCCTCTGTAACGGTTGCTTCAAACAATTTAGTTGTAGGTTCCCAAGTGGAGGTCCTCTCCCAAGACAGTGGAATCAGAGGTTGTTGGTTTAGAGCTTCTGTCATTAAAAAGCACAAAAATAAAGTTAAGGTGCTATATCAGGACATTCCAGATGCAGTTGATGAGACTAAGGAGCTTGAGGAATGGATTTTAGCTTCCAAAATTTCAGTGCATGATGAACTGTGTCTACGAATGTATGGGAGGACCAGGATCCGGCCAGCCTCACCATCCCCTAAATTTGAAATATTGCTGGGGGTTGATGTTGGTTCCATTGTTGATGCATGGTGGCATGATGGGTGGTGGGAAGGCATCATCATTCATAAAGAGTCTGAAGCTAACTATCATGTGTATTTCCCAGGTGAAAAGTTGGTGTCGGTTTTTGATCTTGATAACCTAAGGTGTTCTCAAGAATGGACAGGTAATGAATGGGTGGATGTAAGGGGCAGGCCTGACCTTGTAGCTTCTATATGGTCAAGCTTAAAAACAAAACAAGATCCCTCAAAATCTGATCACAGAAAATCGACCATTTCATCAATTGTTGATGTCATACAAACAAAGCAAGATGATAGTTGCTTGGATTCTGAAAGGGAAAAACCTAGAAAGCATGAGGTTTTTCCAGACCTCTTGAATGATGGTCTGCTTTCCCAGTTAAGGTGGAAGTCATCTAGGAAGAGGAGACGTGGTAATGCTAGCTACTGTGGGAAGCTACAACGTATTGACAACGAAAAGAATGAGTCCCCAAACACACCTGAGTCTCATGCTTCCAACAGATTTATAATTCCAGCATCCTTTCAAGTTGAACATGACATGGTTATGCCTTCTTTAACTAACATGGTTGTGTGTAGGTGA 1905 0.4147 MASLTASFRYMSWEEVLVSSEKRRRVVHYFLKKKDGSSDLAVVAKEKNFRHFSYHCVLPSIDASFTLFNPKSRRDLVLWLDSLVSDWSAEDVSHAAEAAALKDDQLRKLSHGTKEFLWLGSPWTCRKRRKHYQSFRRNGFKISVYDFVCVLAEDKSLVAYLEDMYEDSDGNKMVVVRWFYKIHDVGIVVPGSFCDRDVFFSRYLQDLSIECIDGLATVLNPQHYETFQNEARHTRLEPFICGNQFDNNALKPFDVTQLRGYWKQEIIRYMYTFFDSKSNGSSGQSDDSQESLQHNASLRYTKRLRSIKIDRKNVVDIAADKLQNLSDTRTDTKAGMVSCSSVTVASNNLVVGSQVEVLSQDSGIRGCWFRASVIKKHKNKVKVLYQDIPDAVDETKELEEWILASKISVHDELCLRMYGRTRIRPASPSPKFEILLGVDVGSIVDAWWHDGWWEGIIIHKESEANYHVYFPGEKLVSVFDLDNLRCSQEWTGNEWVDVRGRPDLVASIWSSLKTKQDPSKSDHRKSTISSIVDVIQTKQDDSCLDSEREKPRKHEVFPDLLNDGLLSQLRWKSSRKRRRGNASYCGKLQRIDNEKNESPNTPESHASNRFIIPASFQVEHDMVMPSLTNMVVCR* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0450 634 SMART agenet_At_2 347 413 IPR014002 -
Lan8g0450 634 SMART agenet_At_2 436 492 IPR014002 -
Lan8g0450 634 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 6 626 - -
Lan8g0450 634 Gene3D - 111 255 IPR043151 -
Lan8g0450 634 Pfam BAH domain 142 251 IPR001025 GO:0003682
Lan8g0450 634 PANTHER AGENET AND BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 6 626 - -
Lan8g0450 634 SMART BAH_4 140 256 IPR001025 GO:0003682
Lan8g0450 634 Pfam Agenet domain 352 428 IPR008395 -
Lan8g0450 634 ProSiteProfiles BAH domain profile. 138 256 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0450 Lan-Chr8 6691741 6695531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0450 359 500 PHD Transcription Factor Family AT5G58610 28.859 2.48e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0450 - - gmx:100306709 712.99