Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0448 ATGGCTCATGATTCTCGTCGCAAGCATCATCGATCGTCCTCTTCCGATAACGTCGACAAATCATCCAAGCGCCACAAGCACCGCCACCACTCCCACCGCCACGGGAGCAAAAGACGCGATGAAGAAACTGAAAACGATGTCGTAACAGTTGCTTCGGTTCCTTCTCCTATTCCCATTCCGATTCCCGCTCACGACGACGTGGAGGAGGGAGAGATTCTCGAAGACAACGGTGATGCTGAACCTGGTGAAATTGAGGTGTCTGGAGAGCGAGATCAAGATTCTCGATCTGATAACAAAAACCTGGGACTTCTGACTAAAAGTTCAAAAACTAGAGATGAGGACATTGACAATGTTAAGTTTATTAGTCATGAAGATGATGGTTCTCCTAATCATTCAAGTGCTGGGCATCAAGATAAGAAGGATGCTAGAGCTAGATCAGATGGTGCAGACAATGACAATTTGGATCTTAAATTTTCCAAAGGGGATAAGAGGCAGAATGGGGAACTTGTAAGTTTTAAAGGAAATAAGCAACTAAAAGATGATTATGATGATGGAGCACTCGAGGCTAATGGAGGGATTGTCAATAATATCTGGAATTCATCCTCAGAAAGTGGAGAAAAATATAGAATGTTGGGAAATTCTCCACATGATAGATACAGAAGTCAATCAAGATCAATTGGTCCTAATAGGGAAAGGTCCCGTTCTCGAAGTATATTAGATGAACGTGCTCATTCTAAGAGAATGTACTCTGAGGAACATGGGACCCATGATTATACCAACAGAAATAGGTCTGACTATGATTACGTTGATGAGGAAAGAATGAAGTCATGCCGAAAGGAACATCGCCATCACAGTATAGATTTGGTGGTAGATGATAGAAGGGAACACAGCAGCAGATATCACAGTCGGGAGGCCCATGATAGGGATAGAAGTTGGGATAGAGACTTACACAGGGAGAACAAACGAGGGGAAACAAACAGGAATAGGGAGGTTGAATGGGTGCGTAGAATTGAGAAGGAGCGCGGAAGGAGCAAGGAGAGGGATAGAATGGATGTTGAAGAAGTTAAGATCAGGGAAAGGGAGGAGGTTAGGCGTAGAAGAAGAGAAAAGGAAGGAGATAGGAGCTTGGAGGCAGTGTATGAGAGGGATAGGAGAAGAGGAAAGGATAGAGATAGGAGTATAGATAGAACAAGGGGTGGTGAGAGAGAAAGAGACTGGGAGAGTGAAAGAGGTGATATAAACCGGGAACGGTATTACATTAAGGAAGGAGACAGGCGAGATGATAGATATAGGTACAAGGGTAGAGACAATGCAAATGGCAAGGATAAGGATCTGCATCACGAGGATGGGCATGAAAATCAAGATAGATATAGAAAATATTCAAGGCATGAAGAAACTGAATACCCTCGGGATAGAAAAGGAAATTTTCCTGTAAAAGATTTTAAATCTACGGGAAGTACTGCAGAAGTTGAAAGCAAACTTGAAATAGGTGAGATTGAACAAGATGATATAGATGAGGATACATTGCAACCTGAACAAGAAGAAGATATCAACTGGATCAAAGAGGAGAGTAGGAGGAGAAGAGAAGCCATAATGGAGAAATACAAGAAGCAGCATCAGCAATTTGAACAAGTAGTTGAAAATGAAGGGAAAGATACGAAACCTACAGACATTCCTGAAGCACTTGATGGTAAGAACGATGGAGCTGATGATTCGGAAACACCATTTGCTGTTGGGAAATCACCTGAAAATTTGAAAGATGCTTCAGAGAATGTATCTGGTGCTCGGGGCCTGGGAGAGGGCACTCCAAAGAGCGAGAGATCAGCTGACAAATTTTGTGATGACATATTTGGTGAGACACCAACTGGAGTTCGGAAATCTGGGAGGGGAGATGGTTTACTTATTGAGAGGGTTGGACTAAATGACAATTGGGATGATGCAGAAGGCTATTACAGCTATCGTTTTGGTGAAATACTCGATGGCCGATATGAAGTCACTGCTGCACATGGGAAGGGTGTCTTTTCAACAGTTGTTCGGGCAAAGAATCTTAAAACTGGTAATGGAGAACCAGAAGAAGTAGCTATAAAAATTATTCGCAACAATGACACCATGTACAAGGCAGGTATGGATGAGTTGATCGTATTGAAGAAATTAGTAGGTGCAGATCCGGATGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTAACATGAATCTTCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAAGTGCTGTGAGAGCATATGCAAAACAACTATTTATTGCACTGAAGCATCTACGCAACTGTGGTGTTCTCCATTGTGATATAAAACCTGATAATATGTTGGTCAATGAGGCTAAAAATGTGTTAAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAGGAATGAAGTTACACCATATCTTGTGAGTCGCTTTTATCGTGCCCCTGAAATAATACTTGGATTGCTGTATGATCATCCATTGGATATTTGGTCTGTCGGCTGTTGTCTATATGAGCTTTATACAGGGAAAGTTCTTTTTCCAGGTCTTACAAACAATGACATGCTACGGCTTCACATGGAATTGAAGGGCCCTTTTCCGAAGAAAATGCTACGCAAGGGAGCGTTTACTGAACAACATTTTGATCAGGACCTGAATTTTCTTGCTACAGAGGAGGACCATGTAACCCAAAAGACCATAAAGCGGATGATTCTCAACATAAAGCCAAAAGATATTGGAACAATCATCACTGGTTCTCCTGGGGAGGATCCAAAAATGTTATCCAACTTCAAGGATCTTCTGGAGAAAACTTTTGTTTTGGATCCAGACAAGAGGCTGACAGTCTCACAAGCTCTGAACCACCCATTCATCACTGGCAAGTGA 2946 0.4199 MAHDSRRKHHRSSSSDNVDKSSKRHKHRHHSHRHGSKRRDEETENDVVTVASVPSPIPIPIPAHDDVEEGEILEDNGDAEPGEIEVSGERDQDSRSDNKNLGLLTKSSKTRDEDIDNVKFISHEDDGSPNHSSAGHQDKKDARARSDGADNDNLDLKFSKGDKRQNGELVSFKGNKQLKDDYDDGALEANGGIVNNIWNSSSESGEKYRMLGNSPHDRYRSQSRSIGPNRERSRSRSILDERAHSKRMYSEEHGTHDYTNRNRSDYDYVDEERMKSCRKEHRHHSIDLVVDDRREHSSRYHSREAHDRDRSWDRDLHRENKRGETNRNREVEWVRRIEKERGRSKERDRMDVEEVKIREREEVRRRRREKEGDRSLEAVYERDRRRGKDRDRSIDRTRGGERERDWESERGDINRERYYIKEGDRRDDRYRYKGRDNANGKDKDLHHEDGHENQDRYRKYSRHEETEYPRDRKGNFPVKDFKSTGSTAEVESKLEIGEIEQDDIDEDTLQPEQEEDINWIKEESRRRREAIMEKYKKQHQQFEQVVENEGKDTKPTDIPEALDGKNDGADDSETPFAVGKSPENLKDASENVSGARGLGEGTPKSERSADKFCDDIFGETPTGVRKSGRGDGLLIERVGLNDNWDDAEGYYSYRFGEILDGRYEVTAAHGKGVFSTVVRAKNLKTGNGEPEEVAIKIIRNNDTMYKAGMDELIVLKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLNMNLREVLKKFGRNIGLRLSAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGRNEVTPYLVSRFYRAPEIILGLLYDHPLDIWSVGCCLYELYTGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDQDLNFLATEEDHVTQKTIKRMILNIKPKDIGTIITGSPGEDPKMLSNFKDLLEKTFVLDPDKRLTVSQALNHPFITGK* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0448 981 MobiDBLite consensus disorder prediction 496 513 - -
Lan8g0448 981 Gene3D Phosphorylase Kinase; domain 1 634 722 - -
Lan8g0448 981 ProSiteProfiles Protein kinase domain profile. 663 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0448 981 MobiDBLite consensus disorder prediction 546 609 - -
Lan8g0448 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Lan8g0448 981 MobiDBLite consensus disorder prediction 223 329 - -
Lan8g0448 981 MobiDBLite consensus disorder prediction 426 521 - -
Lan8g0448 981 MobiDBLite consensus disorder prediction 68 82 - -
Lan8g0448 981 MobiDBLite consensus disorder prediction 1 329 - -
Lan8g0448 981 Gene3D Transferase(Phosphotransferase) domain 1 723 979 - -
Lan8g0448 981 MobiDBLite consensus disorder prediction 106 186 - -
Lan8g0448 981 MobiDBLite consensus disorder prediction 426 478 - -
Lan8g0448 981 SUPERFAMILY Protein kinase-like (PK-like) 650 980 IPR011009 -
Lan8g0448 981 Coils Coil 532 552 - -
Lan8g0448 981 Pfam Protein kinase domain 665 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0448 981 SMART serkin_6 663 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0448 981 MobiDBLite consensus disorder prediction 546 570 - -
Lan8g0448 981 CDD STKc_PRP4 662 978 IPR044092 GO:0004674|GO:0006468|GO:0045292
Lan8g0448 981 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 352 981 - -
Lan8g0448 981 MobiDBLite consensus disorder prediction 193 208 - -
Lan8g0448 981 MobiDBLite consensus disorder prediction 83 97 - -
Lan8g0448 981 PANTHER DUAL SPECIFICITY PROTEIN KINASE 352 981 - -
Lan8g0448 981 MobiDBLite consensus disorder prediction 363 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0448 Lan-Chr8 6677888 6688334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0448 670 979 MAP Kinase Gene Family AT4G01370 33.856 1.07e-26 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lan8g0448 Pkinase 9.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0448 K08827 - gmx:100776908 1292.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0448 8 6677888 6688334 Lan20g0475 20 3467686 3475058 LSH