Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0434 ATGCTAAAGTTGTGTGACAAACAGAACAGTCACACTCAAACTACGCCAAACTCAAAGCTTTTCCTCTTTCAATTCATTCAAACTGCTATGGACACATCAAACCCTGCTGCTTTTGTAAATGCCCAGTTGCTTTCCAACTTCATAGGAAAGAAAGTAAGAACAGTGGTCCAGGTTAATCAATCTCATGGTGGGGTCACAATAGCAAAATCTACAGATAATCAGCAACTAACTGTAACAGGATTGCCACCAGTCCCTCTCATGAATTTTGTTGAGGTCATTGGTATTGCTGAAAATAACAACTCCATTAATGCTGAAATATGGACTGACTTTGGAAACACATTTGATACCAACTCTTACAATCAGTTATGCCTGCTAGCAAATGGTGAATTCAAAGGTCTGTTTCTGTAA 408 0.3873 MLKLCDKQNSHTQTTPNSKLFLFQFIQTAMDTSNPAAFVNAQLLSNFIGKKVRTVVQVNQSHGGVTIAKSTDNQQLTVTGLPPVPLMNFVEVIGIAENNNSINAEIWTDFGNTFDTNSYNQLCLLANGEFKGLFL* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0434 135 Gene3D - 29 135 IPR012340 -
Lan8g0434 135 Pfam Replication factor A protein 3 30 128 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Lan8g0434 135 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 30 135 - -
Lan8g0434 135 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 30 135 - -
Lan8g0434 135 SUPERFAMILY Nucleic acid-binding proteins 34 134 IPR012340 -
Lan8g0434 135 CDD RPA3 35 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0434 Lan-Chr8 6540235 6542633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0434 30 135 Core DNA Replication Machinery Family AT3G52630 62.617 8.14e-45 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0434 K10740 - gmx:100781484 169.474