Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0417 ATGGCGGCATTGTCGTTTTCAGTGGCATCTGTCGTAGAGAATGTGCTTCAACAGCATGGTACTCGTCTCAAAGATCTTGACTTGGAATCTAGGAAAGCAGAAGAAGCTGCGTTTAGAAGGTATGATGCAGCAGGGTGGTTGAGGAAATTGGTTGGAATTGTTGCAGCTAAAGATTTACCAGCAGAGCCATCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATCCTATGCAATGTTCTTAATAAGGTTCAACCTGGTGCTGTGCCAAAGGTTGTGGAAAGTCCTGTTGATTCTGCATTAATCCCTGACGGGGCACCATTATCAGCATTTCAGTATTTTGAGAATGTGAGGAACTTTCTGGTGGGTATCAAGGAAATTGGAATTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCAGCCAGGATTGTGAACAGTGTATTGGCCCTTAAATCCTACAGTGAATGGAAACAGACTGGGGCTAATGGTGTGTGGAAATTTGGTGGGACTATTAAACCAACAACCTCTACAAAGTCTTTCGTGAGAAAAAACTCAGAGCCATTTACTAATTCCTTGTCAAGGAACTCCTCTACCAATGAAAAATCTCTTGCTGGTTTTAAGTCTGATGTTGAGTCTAATAAAATGTCTGGTTCTTATTCCTTGAGTATGCTTGTTCGTTCAATTCTATTAGATAAGAAGCCAGAAGAAGTTCCATTGTTGGTTGAATCTGTTTTGAATAAGGTTGTAGAGGCATTTGAGAATCAAATTGTAAGCCATTGTGAACAGACAAAAATAACTCCGAGAGCCACTGTTTCTCAAAGCAATGGATCCTTATCAAAGTTTGTTATGGCAGATAAAAAGGTGGAGAATAAGATACCAATGTTAACAAAGAAAGAAGGATTCATCCATGAAAACCATGTTGCTGATGAGGAGTCGCAAAGACAACTTTTGAAGAAGCGAATGCTCTTTGATCAACAGCAAAGAGATATTCAGGAACTAAAGCACACAGTTCACACCACAAAAGCTGGTATGCAGTTCATGCAAATGAAATTTCATGAGGAGTTCTCAAATCTCGGCATGCACATTCATGGCTTAGCTCACGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAACCGCAAACTGTACAATCAAGTCCAGGATCTTAAGGGAAGTATTAGAGTGTACTGTCGAGTAAGACCCTTCTTATCTGGACAACCAAATTTTGTGAGCTCAGTGGATAGCATAGAAGATGGAACTATCACAATTAGTATTCCTTCAAAGAATGGGAAAGGACGGAAATCCTTCAACTTCAACAAAGTCTTTGGACCATCTTCTGGCCAATCGGAGGTCTTCTCTGATATGCAACCACTCATTAGGTCTGTTCTTGACGGTTTTAACATTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTTACACTATGACTGGACCTAAAGAGATTACTGAGAAAAGCCAAGGTGTAAATTATAGGGCTCTAAGTGATTTATTTCTTACAGCAGATCAAAGAAAGGACACTTTTTGCTATGATGTGTCTGTTCAAATGATTGAGATTTATAATGAGCAAGTCAGAGATCTATTGGTTACTGATGGAACAAACAAAAGATTAGAAATTCGTAGTAATTCTAATAAAGGGCTCAGCGTGCCAGATGCAAGCCTGGTCCCAGTATCATCAACAAATGATGTTATTGAACTAATGAACCTGGGGCAAAGGAACCGTGCAGTTGGAGCAACCGCTCTTAATGACCGTAGTAGCCGATCGCACAGTTGCTTGACTGTTCATGTTCAAGGAAGAGACTTGACATCTGGAACTCTCCTACGTGGATGCATGCATCTGGTTGACTTGGCAGGAAGTGAGAGGGCTGGCAAATCGGAGGCCACAGGAGATAGACTAAAAGAGGCACAACATATTAACAAATCTCTTTCAGCTTTGGGCGATGTCATTGCTTCCCTTGCTCAGAAAAACCAACATGTCCCCTACAGAAATAGTAAACTCACACAATTACTCCAAGATTCACTTGGAGGACAGGCCAAGACGCTTATGTTTGTTCACATGAGTCCAGAGGCTGATTCTATTGGAGAAACAATAAGCACCTTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTTGGAGCTGCAACAGTAAACAAGGACGTTGCTGATGTTAAAGACCTCAAAGAACAGATTGCGAGCCTTAAGGCAGCATTGGCAAGAGCGGAAGTGCAACCAGACGATTCCTTATCTGCCACCTCTGGAAAATATAAGACAAGAAAGGCTAGTGAGCTATCACCTTATCATGCAACCCAGCGGGGTGCAGACGTTGTAGGTGATCTTAGGTGCCGGCAACCAATGTTTGATGTAGACAACTCAGAGCTTCACAGTGATACGACATTGAGGCAAAAGAGTCAGAGCTTCGATTTTGATGAGATATCAGCAAATTCACCTCCCTGGCCCCCGGTGAAAAGTCCTGGACCAACCTACAGGGAGGATGATGGAGAGACTGTATCAGTATCAGGAGAATGGGTTGATAAGGTGATGGTAAACAAGCTAGATGTAAACAACATTGAGAGCATGTTAGAGTGTTGGGAAGCAGAAAATGGGCACTTGTCTGATATCTTTTATCAGAAATATCTCCAAGATTCTTCCAAAATATACTCACAACAATCCTACAGTATGTTTACGGGAGGCAACCAGTTTAATATTGCAGGGTCACATAACATGGATGATCTTGATGCTGCAACCAGCGATTCCTCGGAACCTGACTTACTTTGGCAATTTAATCATTCCAAACTTACCACCCTAGACAATGAAAATAGATCAAAGTCTAGAAAATCTGTCTCAAAGTCAGCAAAAAGCCCAGAACTAAGCAAGAATGCAATCAATTCTTCTCTTGGTCCTTCGCCTTCAAGGAAACAAGCAAATGGTGTATTACATCGAACGGGAAGACATCCAGCCCCAGTTGACATGAAACGTAAGACTGGGAGTAGAAAGTAA 3033 0.4161 MAALSFSVASVVENVLQQHGTRLKDLDLESRKAEEAAFRRYDAAGWLRKLVGIVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVPKVVESPVDSALIPDGAPLSAFQYFENVRNFLVGIKEIGIPTFEASDLEQGGKSARIVNSVLALKSYSEWKQTGANGVWKFGGTIKPTTSTKSFVRKNSEPFTNSLSRNSSTNEKSLAGFKSDVESNKMSGSYSLSMLVRSILLDKKPEEVPLLVESVLNKVVEAFENQIVSHCEQTKITPRATVSQSNGSLSKFVMADKKVENKIPMLTKKEGFIHENHVADEESQRQLLKKRMLFDQQQRDIQELKHTVHTTKAGMQFMQMKFHEEFSNLGMHIHGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSGQPNFVSSVDSIEDGTITISIPSKNGKGRKSFNFNKVFGPSSGQSEVFSDMQPLIRSVLDGFNICIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFLTADQRKDTFCYDVSVQMIEIYNEQVRDLLVTDGTNKRLEIRSNSNKGLSVPDASLVPVSSTNDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGTLLRGCMHLVDLAGSERAGKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHMSPEADSIGETISTLKFAERVATVELGAATVNKDVADVKDLKEQIASLKAALARAEVQPDDSLSATSGKYKTRKASELSPYHATQRGADVVGDLRCRQPMFDVDNSELHSDTTLRQKSQSFDFDEISANSPPWPPVKSPGPTYREDDGETVSVSGEWVDKVMVNKLDVNNIESMLECWEAENGHLSDIFYQKYLQDSSKIYSQQSYSMFTGGNQFNIAGSHNMDDLDAATSDSSEPDLLWQFNHSKLTTLDNENRSKSRKSVSKSAKSPELSKNAINSSLGPSPSRKQANGVLHRTGRHPAPVDMKRKTGSRK* 1011
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0417 1010 Coils Coil 728 755 - -
Lan8g0417 1010 SMART kinesin_4 394 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan8g0417 1010 Pfam Kinesin motor domain 420 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan8g0417 1010 MobiDBLite consensus disorder prediction 964 987 - -
Lan8g0417 1010 MobiDBLite consensus disorder prediction 948 1010 - -
Lan8g0417 1010 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1007 - -
Lan8g0417 1010 MobiDBLite consensus disorder prediction 948 963 - -
Lan8g0417 1010 Coils Coil 16 36 - -
Lan8g0417 1010 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 755 IPR027417 -
Lan8g0417 1010 Gene3D - 24 187 IPR036872 -
Lan8g0417 1010 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Lan8g0417 1010 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 1007 - -
Lan8g0417 1010 SMART ch_5 39 157 IPR001715 GO:0005515
Lan8g0417 1010 Pfam Calponin homology (CH) domain 43 159 IPR001715 GO:0005515
Lan8g0417 1010 MobiDBLite consensus disorder prediction 996 1010 - -
Lan8g0417 1010 MobiDBLite consensus disorder prediction 820 847 - -
Lan8g0417 1010 CDD KISc_C_terminal 394 723 - -
Lan8g0417 1010 PRINTS Kinesin heavy chain signature 469 490 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan8g0417 1010 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan8g0417 1010 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan8g0417 1010 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan8g0417 1010 Gene3D Kinesin motor domain 391 761 IPR036961 -
Lan8g0417 1010 SUPERFAMILY Calponin-homology domain, CH-domain 43 170 IPR036872 -
Lan8g0417 1010 ProSiteProfiles Kinesin motor domain profile. 396 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan8g0417 Lan-Chr8 6386843 6393036 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0417 384 721 Calmodulin-binding Proteins AT5G65930 41.570 3.69e-77 274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0417 K10406 - gmx:100801279 1647.87
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0417 8 6386843 6393036 Lan20g1157 20 15862577 15867623 LSH
Lan8g0417 8 6386843 6393036 Lan4g1382 4 22922140 22928733 LSH
Lan4g0983 4 13590061 13598085 Lan8g0417 8 6386843 6393036 PCT
Lan8g0417 8 6386843 6393036 Lan4g0983 4 13590061 13598085 PCT