Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0416 ATGTCCAATCCTCATGCCCCTATTTCTAAGGGTCTCCTTTGCAATGCAGGTGCTGGTGCTGCCGCTGGAGTTATTGCTGCTTCATTTGTTTGCCCCTTAGATGTAATCAAAACTAGGTTGCAGGTTGGGGTTCCTCAGCTCCCTAATGCAACTGTTAAAGGCAGTCTTATTGTTGGTAGTTTGGAACAAATAGTTCAACGAGAGGGTTTGCGTGGCATGTACCGGGGGCTAGGCCCAACCGTGTTGGCTTTACTTCCAAACTGGGCGGTTTATTTTACTATATATGAGCAGATCAAGAGCCTACTTTCTTCTAGTGATGAAAGTTGCTGTCTTTCAGTTGGAGCTAATGTCGTAGCTGCTTCTGGGGCTGGAGTTGCAACTACCTTTGCTACAAATCCACTTTGGGTTGTCAAGACTAGGCTCCAAACCCAGGGAATAAGACCTGGTGTTGTGCCATACAAGAGCACACTATCTGCTTTAAGAAGAATTTCTTGTGAGGAGGGCATTCGAGGGCTGTACAGTGGCCTTGTACCCGCTCTGGTTGGTGTCAGTCATGTCGCCATCCAGTTTCCCACATATGAGAAAATAAAATTTTATTTGGCAAAACAAGATGAAAAGGCAATGGAAGAGCTTGGTGCATGTGAAGTTGCAATTGCCTCTTCAGTCTCCAAATTTTTTGCATCCACTTTGACATATCCTCATGAGATTATTCGTTCCAGACTTCAAGAACAAGGGCACCACTCAGAAAAGCGGTACTCTAGTGCAACGGACTGTGTTAGAAAGGTATTTCAACAAGAGGGCATCTCTGGTTTTTACCGTGGGTGTGCCATCAACCTACTGAGGACAATACCAGCTGCTGCAATCACATTCACCAGTTTTGAAATGATCAACCGTTTTCTTGTTTCAAGTTTCCCTTCAGATACACATCCTTCTATTTTGTGA 942 0.4469 MSNPHAPISKGLLCNAGAGAAAGVIAASFVCPLDVIKTRLQVGVPQLPNATVKGSLIVGSLEQIVQREGLRGMYRGLGPTVLALLPNWAVYFTIYEQIKSLLSSSDESCCLSVGANVVAASGAGVATTFATNPLWVVKTRLQTQGIRPGVVPYKSTLSALRRISCEEGIRGLYSGLVPALVGVSHVAIQFPTYEKIKFYLAKQDEKAMEELGACEVAIASSVSKFFASTLTYPHEIIRSRLQEQGHHSEKRYSSATDCVRKVFQQEGISGFYRGCAINLLRTIPAAAITFTSFEMINRFLVSSFPSDTHPSIL* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0416 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 211 299 IPR018108 -
Lan8g0416 313 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 3 311 IPR044712 GO:0006862|GO:0055085
Lan8g0416 313 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 3 311 - -
Lan8g0416 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 199 IPR018108 -
Lan8g0416 313 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Lan8g0416 313 PRINTS Mitochondrial carrier protein signature 76 96 IPR002067 GO:0055085
Lan8g0416 313 PRINTS Mitochondrial carrier protein signature 126 144 IPR002067 GO:0055085
Lan8g0416 313 PRINTS Mitochondrial carrier protein signature 220 242 IPR002067 GO:0055085
Lan8g0416 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 101 IPR018108 -
Lan8g0416 313 Pfam Mitochondrial carrier protein 112 203 IPR018108 -
Lan8g0416 313 Pfam Mitochondrial carrier protein 13 104 IPR018108 -
Lan8g0416 313 Pfam Mitochondrial carrier protein 212 302 IPR018108 -
Lan8g0416 313 SUPERFAMILY Mitochondrial carrier 13 295 IPR023395 -
Lan8g0416 313 Gene3D Mitochondrial carrier domain 1 107 IPR023395 -
Lan8g0416 313 Gene3D Mitochondrial carrier domain 108 303 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0416 Lan-Chr8 6372275 6377749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0416 2 307 Chloroplast and Mitochondria Gene Families AT2G47490 72.638 6.11e-155 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0416 K15115 - jre:108994143 464.151