Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan8g0404 | ATGAGAAACATGGAAGAGGTAGTGTTGTTCGTTGATGATTTGAGATCACTTTCTGAGATTTCTCGTTGTAGAATATGTCATGAAGAAGAATTTGAGAGCTTGAAAAGTTTAGAGGCTCCTTGTGCTTGTTCTGGAACCGTTAAGTTTGCTCATAGAGATTGCATTCAGAAATGGTGCGATGAGAAAGGAAATACAGTTTGTGAAATATGTCTCCAGAAATATGAACCTGGATATACAGCAGCTCCAAAGAAATCTCCAATATCTGATGCAGCAATGACCATTAGGGAAAGCCTACAAATTTCAAGGATGGAGCAAGAACCGTTAAACACAAGAATAGAGGGTATTGTTGAAGGAATAGCAATAGAAAACCGTTACTCTGAATGCACATCTGCTGCAGATAGAAGCGCGTCTTGTTGTAGATCACTGGCTTTAACGTTTACATTTATCTTGCTTTTAAGACATCTATTTGAAGTGCTTTCAAATGGAATGGAAGAATATCCATTTACAATTCTTACTGTGTTCATACTAAGGGCCAGTGGAATTATTATACCCATGTACATAATTATTAGGACTCTCGGAGGCATTCATAAAAGTATTCAGCTTCACCATCATCAGGATTCTGACAATGACACATCAATGTCCGATGAAGATGATCAAGAAAACGAGACAATTAATGTCGCAACTTTAAGACATTCATCATAG | 702 | 0.3732 | MRNMEEVVLFVDDLRSLSEISRCRICHEEEFESLKSLEAPCACSGTVKFAHRDCIQKWCDEKGNTVCEICLQKYEPGYTAAPKKSPISDAAMTIRESLQISRMEQEPLNTRIEGIVEGIAIENRYSECTSAADRSASCCRSLALTFTFILLLRHLFEVLSNGMEEYPFTILTVFILRASGIIIPMYIIIRTLGGIHKSIQLHHHQDSDNDTSMSDEDDQENETINVATLRHSS* | 234 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan8g0404 | 233 | SUPERFAMILY | RING/U-box | 21 | 75 | - | - | |
Lan8g0404 | 233 | PANTHER | AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED | 3 | 229 | - | - | |
Lan8g0404 | 233 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 15 | 77 | IPR011016 | GO:0008270 | |
Lan8g0404 | 233 | Pfam | Protein of unknown function (DUF3675) | 76 | 191 | IPR022143 | - | |
Lan8g0404 | 233 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 13 | 81 | IPR013083 | - | |
Lan8g0404 | 233 | Pfam | RING-variant domain | 23 | 70 | IPR011016 | GO:0008270 | |
Lan8g0404 | 233 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 3 | 229 | IPR033275 | - | |
Lan8g0404 | 233 | MobiDBLite | consensus disorder prediction | 203 | 233 | - | - | |
Lan8g0404 | 233 | CDD | RING_CH-C4HC3_MARCH | 23 | 70 | - | - | |
Lan8g0404 | 233 | SMART | ringv_2 | 22 | 71 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan8g0404 | Lan-Chr8 | 6207036 | 6209824 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan8g0404 | 23 | 70 | C3H Transcription Factor Family | AT5G05830 | 38.462 | 4.05e-06 | 44.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan8g0404 | - | - | gmx:100797029 | 372.089 |