Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0403 ATGGCCTTGCGACCTTCATCTTTCATTATTCTTCAGGCTTATGCTGCGATGCTAGTTATTTTCTCATTGACGCTATGCTGGTTTGTCATGGTCACACATATATTGAACCAAGAAAAAATGGTCACTGATGCTATTAGCAATCAACATGTACAATTTTATTTAGCTACCAAAGATGGAAAAGTTCTAGTACAAGGGATCAAGAATACTCGTTTGGTCCATTATAATGACACAGTTTCATTCCAATCTTTGAATCCAAATGGAAATCTGATTAGCAATTCGGGTAGTGTATCTTGCAAGGATAAAGCCATTGCTACTAGGTTGAATATTTGGGATACTGAATATTTAATTCAATGCCACCCCATTGATATTATGGGGAAAAAATCGGTGTATATTTTAGCTGTGCCACAAAATGGATCAGTTAACTTTGATCTGAATCATTATAAGAAAAAAGGATTGCAACTAATGATTGCAATGATTGTAATGATATTAATTGCAATGTTCAGTTTTCTATTCATAAATGTTAGAGCCACAAGGAGAGAAATGCAATTGTGTGCATCACTGATCAAACAAATGGAAGCAACCCAACAAGCTGAGAGAAAGAATATGAATAAGAGTCTTGCTTTTGCTAGTGCTAGCCATGATGTTCGAACTTCTCTAGCTGGTCTTACTGGTTTGATAGAAATGTCATATGAGTTAGTAACCCCACATTCAGAATTGGAAACCAATCTAAAACAAATGAACAATTGTACAAGAGATTTACTAGGATTGTTGAATTCTATACTTGACACAAGCAAAATTGAGGCAGGAAAAATGCATCTTGATGAAGAAGAATTTGATCTTTCCTATCTCCTAGAAGATGTAGTTGATTTATACCATCCAGTGGCTATGAAGAAAGGTGTAGATATTGTATTGGACCCTTGTAATGGTTCTCTAATGAGATATTCATCTGTGAAAGGTGACAGAGGAAAACTAAAACAAGTTTTGTGTAACTTACTGAGCAATGCTGTTAAATTTACTGATGAGGGTCACATAGCAGTTCGAGCATGGGCTCAGAAACCAAACATGCAGAACTCAATAATGGCTACTAACCAATATAGCTTCACTAAATACTTATCATGCTTATTTTATAAGAAAAATGAAACACATGATGACATAGAAGCAGCAAAGATTCCAATCCAACAAGATCCTTATTCAATAGATGTTACTTTTGAAGTGGATGATACAGGAAAAGGAATTCCTAAAGAGAAATACAAGTCTGTGTTTGAGAATTATGTACAAGTCAAAGAAACTGCTCTTGGTCAAGGAGGAACTGGTTTGGGACTTGGGATTGTGCAGTCCTTGGTGCGTTTGATGCATGGAGACATTGGAATTATGGACAAGGATATTGGAGAAAAGGGAACCTGCTTCAGGTTCAATGTGCTCCTAACTGTATGTGAGACAGTGACTAATGTTAGCACAAAGGAAGGTTCTGAGTATGGATCAGGTGACAGAAACAGTGGGCAAGGACTAATCATTAGAACTACTAGTTCTGGTTCAAGCATTTGTAATTCCTTGAGTCCCAGGTTACATATTTGCAGCTCTACTCGTAGGCTGCAAGGTTCGCATGTTGTTCTTTTGATTATAGACAAAGAGCGCCGAAGGATTTCGCAAAGGTTCATGGAGAGCTTAGGAATCGAAGTTAAGGTTGTGAGGCATTGGAAGCATTTGTTTGATACTCTCAAACATATTAATCAGAAGGGTAGCCATTCAAGTAACCAGAGTTCACCAGTGTCTTCAGAATTGAGTTTTAGGTCCATATCTCATAGTTCTTTTGCAAGAACCAAAGCATTTCCTTTGAGTTCAATGGATGGAACTGAGTCAATGCCTCCAGTTCTCAAGAAGAATGATACAATTGGAGCTGCAACAGGTTTCATTCTGATTGTAATTGATGCAAATGCAGGGCCATTTTCTGAACTTTACAGGGTTGTATCTATCTTCAGAAAAGGCCTATTCAACCCATGTAAGATTGTTTGGTTAAATAAGCCACTTTTTCATGGTAACAATTTTAAGACAACCCTTAACAAGGATTTGCTTGATCCAAATGATATTGTTATATCGAAACCTTTTCACGGTACGCGGTTGTTCCAAGTTATTAAGCTTCTTCCTGAGTATGGTGGTGCTTGGCAAAGTAGTTTTTGGAGATCGAAGAAAGAAAATGCAAATGAACAAATTGGTGGAAAGATTTGTAGGGTTGCAAGCTTATCAAAACAGAAGTCCCCTTTGATGGATAGATCACAAAGTGAACCAAGTACTGATAGAAGATCATGCCAAAGTGTTGAACAAATGAAAAAAGGAACACAAGAATGTGGAGACTCAATCAACAATAAATCTTTGAGTGGTAAGAGATTTTTGGTTGTTGAGGACAATGCCTTGTTACGCAAGCTAGCATTGGCTACTTTGTTTCCACTTGGTGTAACTATTGAGCAATGTGAAAATGGTGAACAAGCTGTGCAGTTATTTGAGGAAGGTTTGGCTAGAAGGGATTTACCTTATCCTCCTTATGATTACATCTTAATGGATTGTGAGATGCCAGTAATGGATGGGTTTGAAGCAACAAGACAGATTCGTGAAATGGAAAGGCCCTATGGTTTTCATATTCCTATAATTGCATTAACTGCTCATACTGATAATGTAGCCACAGAAGATGGAATGGACTTTCATTTAGTGAAGCCCATTAAGAGACAGCACTTACTTGAAGCCATCAGATATATACAACTTAAATATTAG 2766 0.372 MALRPSSFIILQAYAAMLVIFSLTLCWFVMVTHILNQEKMVTDAISNQHVQFYLATKDGKVLVQGIKNTRLVHYNDTVSFQSLNPNGNLISNSGSVSCKDKAIATRLNIWDTEYLIQCHPIDIMGKKSVYILAVPQNGSVNFDLNHYKKKGLQLMIAMIVMILIAMFSFLFINVRATRREMQLCASLIKQMEATQQAERKNMNKSLAFASASHDVRTSLAGLTGLIEMSYELVTPHSELETNLKQMNNCTRDLLGLLNSILDTSKIEAGKMHLDEEEFDLSYLLEDVVDLYHPVAMKKGVDIVLDPCNGSLMRYSSVKGDRGKLKQVLCNLLSNAVKFTDEGHIAVRAWAQKPNMQNSIMATNQYSFTKYLSCLFYKKNETHDDIEAAKIPIQQDPYSIDVTFEVDDTGKGIPKEKYKSVFENYVQVKETALGQGGTGLGLGIVQSLVRLMHGDIGIMDKDIGEKGTCFRFNVLLTVCETVTNVSTKEGSEYGSGDRNSGQGLIIRTTSSGSSICNSLSPRLHICSSTRRLQGSHVVLLIIDKERRRISQRFMESLGIEVKVVRHWKHLFDTLKHINQKGSHSSNQSSPVSSELSFRSISHSSFARTKAFPLSSMDGTESMPPVLKKNDTIGAATGFILIVIDANAGPFSELYRVVSIFRKGLFNPCKIVWLNKPLFHGNNFKTTLNKDLLDPNDIVISKPFHGTRLFQVIKLLPEYGGAWQSSFWRSKKENANEQIGGKICRVASLSKQKSPLMDRSQSEPSTDRRSCQSVEQMKKGTQECGDSINNKSLSGKRFLVVEDNALLRKLALATLFPLGVTIEQCENGEQAVQLFEEGLARRDLPYPPYDYILMDCEMPVMDGFEATRQIREMERPYGFHIPIIALTAHTDNVATEDGMDFHLVKPIKRQHLLEAIRYIQLKY* 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0403 921 Pfam His Kinase A (phospho-acceptor) domain 206 269 IPR003661 GO:0000155|GO:0007165
Lan8g0403 921 ProSiteProfiles Histidine kinase domain profile. 210 477 IPR005467 -
Lan8g0403 921 PANTHER TWO-COMPONENT HISTIDINE KINASE 51 918 - -
Lan8g0403 921 PANTHER HISTIDINE KINASE CKI1 51 918 - -
Lan8g0403 921 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 475 IPR003594 -
Lan8g0403 921 SMART REC_2 794 914 IPR001789 GO:0000160
Lan8g0403 921 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 191 271 IPR036097 GO:0000155|GO:0007165
Lan8g0403 921 CDD REC_hyHK_CKI1_RcsC-like 796 914 - -
Lan8g0403 921 Gene3D - 190 269 - -
Lan8g0403 921 PRINTS Bacterial sensor protein C-terminal signature 401 415 IPR004358 GO:0016310|GO:0016772
Lan8g0403 921 PRINTS Bacterial sensor protein C-terminal signature 419 429 IPR004358 GO:0016310|GO:0016772
Lan8g0403 921 PRINTS Bacterial sensor protein C-terminal signature 435 453 IPR004358 GO:0016310|GO:0016772
Lan8g0403 921 ProSiteProfiles Response regulatory domain profile. 795 918 IPR001789 GO:0000160
Lan8g0403 921 Gene3D - 771 918 - -
Lan8g0403 921 CDD HisKA 201 265 IPR003661 GO:0000155|GO:0007165
Lan8g0403 921 SUPERFAMILY CheY-like 792 917 IPR011006 -
Lan8g0403 921 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 258 473 IPR036890 -
Lan8g0403 921 MobiDBLite consensus disorder prediction 751 784 - -
Lan8g0403 921 SMART HisKA_10 203 269 IPR003661 GO:0000155|GO:0007165
Lan8g0403 921 MobiDBLite consensus disorder prediction 749 784 - -
Lan8g0403 921 Pfam Response regulator receiver domain 797 915 IPR001789 GO:0000160
Lan8g0403 921 SMART HKATPase_4 319 477 IPR003594 -
Lan8g0403 921 Gene3D - 270 482 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0403 Lan-Chr8 6196446 6202695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0403 51 920 Histidine Kinase Gene Family AT2G47430 41.950 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan8g0403 HATPase_c 2e-24 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0403 - - lang:109344729 1229.93