Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0401 ATGGCTTCGATTCAACGCTCAGCTGCGAGTTCGGGATCGGAAGGTGGAGATCCTGCTTCGATTGACGAGAGGAAGAGGAAGAGGATGATTTCGAACCGCGAATCCGCGAGGCGGTCGAGGATGAAGAAGCAGAAGGTTCTGGAAGATTTGACTGAAGAAGTGTATCGATTGCAAAGCTCAAACAAGGAGATAAATCAGAGCATCAAAACGAAGGAAGATGCGTATTTGAAAATGGAATCTGGCAACAACATTCTCAAGGCTCAGACAATGGAGCTCTCAGATCGGTTACGTTCTCTGAATTCCATCATTGAAATGGCTGAAGAGGTTAACGGGAACAGGAACGGTAACTTTAACGTTTTCCCTATTGAGATGCCGCAGATTTTGGATCCTTTTATGAACCCGTGGCAGTTATATTATCCGTTTCATCCTCTTATGGCGTCTCCTGATATGTCCCTGCATTGA 462 0.4567 MASIQRSAASSGSEGGDPASIDERKRKRMISNRESARRSRMKKQKVLEDLTEEVYRLQSSNKEINQSIKTKEDAYLKMESGNNILKAQTMELSDRLRSLNSIIEMAEEVNGNRNGNFNVFPIEMPQILDPFMNPWQLYYPFHPLMASPDMSLH* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0401 153 MobiDBLite consensus disorder prediction 18 44 - -
Lan8g0401 153 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 151 - -
Lan8g0401 153 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
Lan8g0401 153 Coils Coil 33 67 - -
Lan8g0401 153 Gene3D - 22 78 - -
Lan8g0401 153 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
Lan8g0401 153 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 151 - -
Lan8g0401 153 MobiDBLite consensus disorder prediction 1 44 - -
Lan8g0401 153 CDD bZIP_plant_GBF1 25 75 IPR045314 GO:0003700|GO:0006355
Lan8g0401 153 Pfam bZIP transcription factor 24 81 IPR004827 GO:0003700|GO:0006355
Lan8g0401 153 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 69 IPR004827 GO:0003700|GO:0006355
Lan8g0401 153 SUPERFAMILY Leucine zipper domain 24 75 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0401 Lan-Chr8 6163996 6165130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0401 1 150 bZIP Transcription Factor Family AT3G62420 48.366 4.62e-41 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan8g0401 bZIP_1 2.8e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0401 K25786 - jre:108981706 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0401 8 6163996 6165130 Lan20g0541 20 4072167 4073282 LSH
Lan8g0401 8 6163996 6165130 Lan4g1369 4 22638306 22639517 LSH