Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0395 ATGGATACTAACACCTCTCCTAAACCAGAAACTCATGCATCCAAAAAACGGAAAATGGTTCAGAAAACAGTGGTCACGGTGAAGATAGGAGAAAATGTTAGCAAAGTGAAGAATGAAGGGCTACCTAATGATTTTTGGTCTTGGAGAAAATATGGACAAAAACCAATTAAAGGGTCTCCTTATCCAAGGGGATATTATAGGTGCAGCACATGCAAGGGTTGTTCAGCCAAAAAACAAGTAGAGAGATGCAGGACTGATGCATCAATGCTCATAATAACCTATACCTCTTCACATAACCACCCTTCTTCTGATCATGTCCCATGTTCCAAAAATTTAGTCCAACTACCAAAACAACCTGAAACCCAAACCTCTGAACATGTTCCTAGTAGTCCTACCCCAAAGGAGGAAGACCAAGAAAAGAAACAAGAGAAGGAAAATCATAATGAGTCCACCATGACAAGTGATCACAATAGTACAAATGAAGAGAAGTTTCATTACTTGCAATCTCCAACACCTTGCAATGAAGAGGTTATAGACCAAGATGATATTTTCAAACTCAACAACCAAGAGAAAACCCATGAGGAAATGGACCCCATCTTAGAGATAGAGCCTATGTGTTATTCACAAATCAAGAATTTGCCAGCACCTAAATTAGAAGAACTTGATTTTTTCGATGAGCTTGAGGAGCTACCCATGTCTTCATCATTCCTAGACTATACAAAAATCAGTTTTTCCAATGAAAGGATTCCCATTGTCCCTTCTTAA 765 0.3869 MDTNTSPKPETHASKKRKMVQKTVVTVKIGENVSKVKNEGLPNDFWSWRKYGQKPIKGSPYPRGYYRCSTCKGCSAKKQVERCRTDASMLIITYTSSHNHPSSDHVPCSKNLVQLPKQPETQTSEHVPSSPTPKEEDQEKKQEKENHNESTMTSDHNSTNEEKFHYLQSPTPCNEEVIDQDDIFKLNNQEKTHEEMDPILEIEPMCYSQIKNLPAPKLEELDFFDELEELPMSSSFLDYTKISFSNERIPIVPS* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0395 254 Pfam WRKY DNA -binding domain 43 101 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan8g0395 254 MobiDBLite consensus disorder prediction 1 20 - -
Lan8g0395 254 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 8 237 IPR044810 GO:0003700
Lan8g0395 254 MobiDBLite consensus disorder prediction 130 160 - -
Lan8g0395 254 SMART WRKY_cls 42 102 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan8g0395 254 MobiDBLite consensus disorder prediction 117 160 - -
Lan8g0395 254 ProSiteProfiles WRKY domain profile. 37 103 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan8g0395 254 Gene3D WRKY domain 27 103 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan8g0395 254 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 8 237 - -
Lan8g0395 254 SUPERFAMILY WRKY DNA-binding domain 38 102 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0395 Lan-Chr8 6105438 6107060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0395 6 101 WRKY Transcription Factor Family AT2G34830 60.825 5.16e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan8g0395 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0395 - - gmx:100127368 295.819