Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0391 ATGGTTCCAAAAACTCATTTCCACATCGTTCTATTTCTTCTCTCATCTTTATACATAACTTCTGGTTCCAATAGACAGGCCAATTATGACAATTGGATATCTTGGAACGTGAAGAATTACCAGAAAAAGGGCACTTTGGCAATCAAATGGAAGGGTCAAGATTTGAATCTGAGGAAGGCTGAGAGTAACAAAGTTAGAATAACAGTTAGACAAGACGGTGCTGGAGACTTCAAGACAATTAGAGAAGCTCTTAATAGCATCCCACCATACAATACTAGAAGAGTAACAATGTTGATTGCACCAGGTGTTTATAGGGAGAAGCTTATGATTCCCAGAACTATGCCTTTCATAACATTGTTAGGAGACGCAAGGGATCCACCAACCATTACTGGAAATGATACAGCTTCTACCACTGGAAGGACGTTTCAGAGTGCAACTGTTGCTGTAGATGCTAGCTACTTTATAGCCATCAACATAAAATTTGAGAACAGTGCTCCGCATGAGATTGGATCAATGGGAGGACAAGGCGTGGCGCTTCGCATATCAGGAACTAAAGCTGCTTTTTATAATTGCACTTTCTATGGAACTCAAGACACTTTATATGATCACAAAGGCCTTCACTACTTCAACAACTGCTTTATTCAAGGCTCTGTTGATTTCATCTTCGGGTCTGGGAGATCCCTTTACGAGAACTGCAAACTAAACTCCATAACAAAGAAGGTGGCTTCCATTACTGCTCAAAAGCGTACAAATTCGTCACTGGAAAGTGGATTTTCGTTCAAAAACAGTGTAGTAACAGGGAGTGGGCAAGTTTATCTAGGAAGAGCATGGGGAGATTATTCCAGAGTTGTTTTCTCTTTTACCTACATGGACAACATAGTTATCTCCAAAGGATGGAGTGATTGGGGTGACCAAAAGCGTGACATTGGAGTATATTATGGAGAATATAAGTGTAGCGGGCCAGGGGCTAACTTGACTGGAAGAGTGCCATGGGCTAGAATGCTTTCAGATGAAGAGGCTAAGCCTTTTGTTGGGATCAACTTTATTGAAGGGGACACTTGGCTTATTAGGCCATAA 1077 0.4123 MVPKTHFHIVLFLLSSLYITSGSNRQANYDNWISWNVKNYQKKGTLAIKWKGQDLNLRKAESNKVRITVRQDGAGDFKTIREALNSIPPYNTRRVTMLIAPGVYREKLMIPRTMPFITLLGDARDPPTITGNDTASTTGRTFQSATVAVDASYFIAINIKFENSAPHEIGSMGGQGVALRISGTKAAFYNCTFYGTQDTLYDHKGLHYFNNCFIQGSVDFIFGSGRSLYENCKLNSITKKVASITAQKRTNSSLESGFSFKNSVVTGSGQVYLGRAWGDYSRVVFSFTYMDNIVISKGWSDWGDQKRDIGVYYGEYKCSGPGANLTGRVPWARMLSDEEAKPFVGINFIEGDTWLIRP* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0391 358 PANTHER PECTINESTERASE 20 356 - -
Lan8g0391 358 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 20 356 - -
Lan8g0391 358 Gene3D - 60 357 IPR012334 -
Lan8g0391 358 Pfam Pectinesterase 67 352 IPR000070 GO:0030599|GO:0042545
Lan8g0391 358 ProSitePatterns Pectinesterase signature 2. 214 223 IPR033131 -
Lan8g0391 358 SUPERFAMILY Pectin lyase-like 65 355 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0391 Lan-Chr8 6062812 6066724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0391 67 355 Carbohydrate Esterase AT5G47500 47.315 5.31e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0391 K01051 - qsu:112011696 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0415 19 5425667 5429454 Lan8g0391 8 6062812 6066724 PCT
Lan8g0391 8 6062812 6066724 Lan19g0415 19 5425667 5429454 PCT