Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0388 ATGGTGGTTGATGTGGAACTTGTGTGTAAACAGAGCGTGGCTACGTTGGATGTGAAGTATTTTCCGAACAAAGAGATCAAAAATCATGAGATCGGAGGTGAAGATGCTATTTCACCTCCTAGTTTTGATCGAGTTCGTGCTTCTGAGTCAGTTTCGGCCAAGTTATCTACTTCACAAGAAGATGTTAAGCCTGGTGAGAGAATCTCAGATGCTTCTCTAGAATCTGATGTTATGCAATTTGTCCCCTGCATCCGTTCTGGTAGTTTTGTTGACATCGGGCCACGAAGATACCTTGAAGATGAACATATAAAGATAGATGATTTGTCTTCTCATCTAGGATCACTATACAACTTTCCAAAACCAAGTGCCTTTTATGGAGTGTTTGATGGTCATGGAGGACCAGAGGCTGCAGCTTATGTAAGGAAAAATATCATGAAGTTCTTTTTTGAGGATGCCAGCTTCCCTCAGACATCTGAAGTTGATAATGTATTTTTACAAGAGCTTCAGAATTCCCTCACAAAGGTGTTTCTTTTGGCTGACTCGGCTTTGGCTGATGAATGCAGTGTGAATACTTCATCGGGGACCACAGCCCTTACTGCTTTCATATTTGGAAGGCTCCTAATGGTGGCTAATGCTGGTGATTGCCGAGCAGTTCTCTGTCGTAAAGGTGAGGCCATTGACATGTCTCAAGATCACAGGCCTACTTATCCATCAGAGAGGAGGCGTGTTGAAGAATTGGGCGGTTTCATAGATGATGGTTATCTTAACGGGGTGTTATCTGTTACTCGAGCACTGGGGGACTGGGACATGAAGTTACCTAAGGGCTCTTCCTCACCTTTGATCGCAGAACCTGAAATCCGGCAAGTTATTCTTACAGAGGATGATGAATTCCTCATTATAGGATGTGACGGCATCTGGGATGTAATGTCAAGTCAGCATGCTGTTAGCCTTGTACGCAGAGGCCTGAGGCGGCACGATGATCCAGAACAGTGTGCAAGAGACCTGGCTATGGAGGCATTACGCCTGAACACATTTGACAATCTTACTGTAATCATTGTATGCCTCTCTTTCCTTGATCACAGCGAGCCATCCCCGCCTCGCCAACCGAAACTGAGATGCTGTAGCCTCTCTGCAGAGGCTCTTTGTAACTTGAGAAGCTTGTTGGAAGGCAATGCTAGCAACTGA 1185 0.4506 MVVDVELVCKQSVATLDVKYFPNKEIKNHEIGGEDAISPPSFDRVRASESVSAKLSTSQEDVKPGERISDASLESDVMQFVPCIRSGSFVDIGPRRYLEDEHIKIDDLSSHLGSLYNFPKPSAFYGVFDGHGGPEAAAYVRKNIMKFFFEDASFPQTSEVDNVFLQELQNSLTKVFLLADSALADECSVNTSSGTTALTAFIFGRLLMVANAGDCRAVLCRKGEAIDMSQDHRPTYPSERRRVEELGGFIDDGYLNGVLSVTRALGDWDMKLPKGSSSPLIAEPEIRQVILTEDDEFLIIGCDGIWDVMSSQHAVSLVRRGLRRHDDPEQCARDLAMEALRLNTFDNLTVIIVCLSFLDHSEPSPPRQPKLRCCSLSAEALCNLRSLLEGNASN* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0388 394 SUPERFAMILY PP2C-like 79 356 IPR036457 -
Lan8g0388 394 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 372 - -
Lan8g0388 394 Gene3D - 72 359 IPR036457 -
Lan8g0388 394 CDD PP2Cc 84 355 IPR001932 -
Lan8g0388 394 Pfam Protein phosphatase 2C 95 347 IPR001932 -
Lan8g0388 394 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Lan8g0388 394 ProSiteProfiles PPM-type phosphatase domain profile. 85 355 IPR001932 -
Lan8g0388 394 SMART PP2C_SIG_2 100 355 IPR001932 -
Lan8g0388 394 SMART PP2C_4 75 353 IPR001932 -
Lan8g0388 394 PANTHER PROTEIN PHOSPHATASE 2C 1 372 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0388 Lan-Chr8 6039020 6041517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0388 98 390 PP2C-type Phosphatase Gene Family AT3G62260 68.707 4.90e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0388 K14803 - gmx:100819791 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0388 8 6039020 6041517 Lan20g0555 20 4219918 4222548 LSH