Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0370 ATGGAAGGAGAGGCAAAAAAATTAGACCTGGTATGGCATGCTGTTTCGTCGTGGACTTGGGATGCCCAGGATGAAACATGTGGGATTTGTAGGATGGCCTTTGATGGATGTTGTCCTGACTGTAAACTCCCCGGGGATGATTGCCCACTGATTTGGGGTCAATGCAATCACGCGTTTCATTTGCACTGTATCCTGAAATGGGTGAATTCTCAGACATCACAAGCACATTGCCCCATGTGCCGTAGGGAATGGCAGTTTAAAGGATGA 267 0.4757 MEGEAKKLDLVWHAVSSWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGQCNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0370 88 PANTHER RING BOX 11 87 - -
Lan8g0370 88 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 11 87 - -
Lan8g0370 88 CDD RING-H2_APC11 24 86 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Lan8g0370 88 Pfam Anaphase-promoting complex subunit 11 RING-H2 finger 11 87 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Lan8g0370 88 ProSiteProfiles Zinc finger RING-type profile. 38 81 IPR001841 -
Lan8g0370 88 SUPERFAMILY RING/U-box 12 87 - -
Lan8g0370 88 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 88 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0370 Lan-Chr8 5832883 5834533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0370 38 81 C3H Transcription Factor Family AT1G72220 41.304 9.84e-07 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0370 K03358 - ccaj:109818243 191.815