Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0357 ATGGCGCCAAAATCCAAAGCCGCGAAAACTTCCGCCGCTTCATCTCCGGCCACAGCCCCCTTCAAGGCGGGCTTCGCTGTCGAGATCAGCTCCGACGACCATGGTTTCCGCGGTTCATGGTTCACCGGCAAGATCATCCGCCGCGTCGCCAATAACCGGTTCTTAATCGAGTACGACAACCTCATGGAAGATGATAGCGGTTCGAAGCGGTTGAGAGAGGTTCTTAACCTCCACCAGCTACGGCCGATTCTCCCGACGGAGACCGGTCGGGAATTCAAGTTCGGCGATGAGGTTGACGCGTACCATAACGACGGGTGGTGGGAGGGTCACATTACCGAAGAGTGTGGGGATGGAAGGTTCGCTGTGTATTTCAGAGTTTCGAGGGAGCAGATCGTGTTCCAGAAAGAAGAACTTAGACTCCACCGTGAGTGGTTCCATGAGGTTTGGGTTCCACCATTCGAACAACAACAACAGCAGCAGCAAGAACCAGAGGAAGTGTTGACACCAGCTCTGAAGTCTGCTGAAACTGTGACACCAGCTGTGAAGTCTGCTGAAACTGTGACTCCAGCTGTGAAGTCTGCGGAAACTGTGACACGAGCTGTGAAGTCTGCTCAAACTGTGACACCAAATGTGAAGTCTGTTAAAATTGTGACAGAGGAGAGATTTAGTGTAGGGACCCCAGTTGAGGTTAGCAGTGATGAAGAAGGTTTCCAAGGAGCTTGGTTTTCTGCTACTGTTGTTCAAGTGATAGGAAAGGGAAAGTTCCTTGTTGAGTACCAGAGCCTACTAGCTGATGATGGTTCCCAGCTTTTGAGAGAGGAGGTTGATACCCACCACATAAGGCCTCACCCGCCACAAACTGTTGATGGTCACTTTAGTCTTCTTGAAGAAGTCGATGCTTTTCACAATGATGGCTGGTGGGTTGGCATGGTTTCTAAATTTCATGACAACTCAAGGTATGTAGTTTACTTCAGGAACAGCAGTGAAGAGCTAGAGTTTCAGCACTCCCAGTTGAGGAAACACCAGGACTGGATTGATGGCAAATGGACTGTGGCTTCGAAGGTGTTGGAGTTGTGA 1077 0.5023 MAPKSKAAKTSAASSPATAPFKAGFAVEISSDDHGFRGSWFTGKIIRRVANNRFLIEYDNLMEDDSGSKRLREVLNLHQLRPILPTETGREFKFGDEVDAYHNDGWWEGHITEECGDGRFAVYFRVSREQIVFQKEELRLHREWFHEVWVPPFEQQQQQQQEPEEVLTPALKSAETVTPAVKSAETVTPAVKSAETVTRAVKSAQTVTPNVKSVKIVTEERFSVGTPVEVSSDEEGFQGAWFSATVVQVIGKGKFLVEYQSLLADDGSQLLREEVDTHHIRPHPPQTVDGHFSLLEEVDAFHNDGWWVGMVSKFHDNSRYVVYFRNSSEELEFQHSQLRKHQDWIDGKWTVASKVLEL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0357 358 SMART agenet_At_2 90 146 IPR014002 -
Lan8g0357 358 SMART agenet_At_2 290 346 IPR014002 -
Lan8g0357 358 SMART agenet_At_2 19 88 IPR014002 -
Lan8g0357 358 SMART agenet_At_2 220 288 IPR014002 -
Lan8g0357 358 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 212 355 - -
Lan8g0357 358 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 17 160 - -
Lan8g0357 358 Gene3D - 213 292 - -
Lan8g0357 358 Pfam Agenet domain 26 85 IPR008395 -
Lan8g0357 358 Pfam Agenet domain 225 285 IPR008395 -
Lan8g0357 358 PANTHER AGENET-LIKE DOMAIN, AGENET DOMAIN, PLANT TYPE-RELATED 212 355 - -
Lan8g0357 358 PANTHER AGENET-LIKE DOMAIN, AGENET DOMAIN, PLANT TYPE-RELATED 17 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0357 Lan-Chr8 5711618 5714815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0357 232 344 PHD Transcription Factor Family AT5G58610 30.597 5.20e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0357 - - lang:109346228 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0357 8 5711618 5714815 Lan20g0608 20 4806552 4808698 LSH
Lan8g0357 8 5711618 5714815 Lan4g1319 4 21998273 22003825 LSH