Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0353 ATGTCTTCTCAACAAAATATAGGTGATTCCACTAATTCAGACAAGAAACGCAGAAAAATCACACACAACAACCAACCCATCGATCTAAATTCCCCTAACCTGATCCTATGGAGATCTCAATCTCAGCAACAGATCTATTCCTCCAATCTCGTCCAAGCCCTCCGCCGCTCTCCTCCTTCCCCCGCCGCCCGTCAAATCCGCGACACCGCCGACCGAATCCTGGCACGTGCTGCCAAGGGAAGAACACGCTGGAGCCGCGCGATTCTCGCGTCGCCACGATGGAAGCTACAAAGGAATAGACTGAAGAAAGTGAAGAAGGCTTCGAATGGATTGAAGAAAACGGGAATTACCGGAGGTGACCGGAAGAGGAAGAGGAGGTTACCGGCTGTGGAGAAGAAAGCGAGAGTTCTTAGCCGGTTGGTTCCAGGTTGCAAGAAAGTGTCGTTCCAGAACCTTCTGGAAGAAGCGAGTGATTATATTTCGGCGTTGGAGATGCAAGTAAGAGCCATGACGGTTCTTACTCAGTTACTCGACGGCGGAATGGTGAGTTGA 552 0.5054 MSSQQNIGDSTNSDKKRRKITHNNQPIDLNSPNLILWRSQSQQQIYSSNLVQALRRSPPSPAARQIRDTADRILARAAKGRTRWSRAILASPRWKLQRNRLKKVKKASNGLKKTGITGGDRKRKRRLPAVEKKARVLSRLVPGCKKVSFQNLLEEASDYISALEMQVRAMTVLTQLLDGGMVS* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0353 183 PANTHER TRANSCRIPTION FACTOR BHLH150 10 179 - -
Lan8g0353 183 MobiDBLite consensus disorder prediction 1 30 - -
Lan8g0353 183 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 10 179 IPR044660 GO:0006355
Lan8g0353 183 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 124 176 IPR036638 GO:0046983
Lan8g0353 183 CDD bHLH_AtIBH1_like 121 174 IPR044549 GO:0006355
Lan8g0353 183 MobiDBLite consensus disorder prediction 102 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0353 Lan-Chr8 5646909 5657952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0353 3 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 45.946 5.13e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0353 - - aprc:113873135 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0353 8 5646909 5657952 Lan20g0612 20 4835993 4836898 LSH
Lan8g0353 8 5646909 5657952 Lan4g1313 4 21942300 21943194 LSH
Lan16g1024 16 17448030 17449206 Lan8g0353 8 5646909 5657952 PCT
Lan8g0353 8 5646909 5657952 Lan16g1024 16 17448030 17449206 PCT