Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0351 ATGGAGGTGCTGCTTTTTCGAGCAATGATTCTCCCTCTTTTTTTGTTCTTTATCTCTTCTTCCTGGGTTTGTATAGTTGCACAAGACTGTGGCCGAAACCAAGTTACAAAAACGATTGTTGTTGATAAATCTGGGAGAACAGGATTCATAACAGTTCAATCAGCAATCGATTCAATAGCTGAAAACAACAATCAATGGGTTAAAGTTCGCATAAATGCTGCCACTTACACAGAGAAGGTGGAAATTCCTTATAACAAGCCGTGCATATATTTGGAAGGTGAAGATAGACATTCCACCATTATCACATACAATGATCACCAACAAACAGATATTAGTGCCACTTTCTCTTCCTTCCCAGACAATATTATTGCACGGAGTATTACTTTTATGAACTCTTACAATTTGCAACGTGGGAAACGTAGAACCCAAGATAGCGAAGTTCTCCCAGCACTTGCAGCAAGAATATATGGAGACAAATGTGTGTTTTATGATTGCAGCTTTATTGGTTTTCAAGATACATTGTGGGATGTAGAAGGTCGTCATTACTTCAAAGATTGCACTATAGAAGGAGCTATAGACTTCATCTTTGGTTACGGTCAATCCTATTACGAGAACTGCATTCTCAATGCGACCTCCTCAGGTTTTGTAACTGCTCAAGGACGCAGTGGGAAGAATGATAAAAGTGGTTTTGTATTCAGAGGTGGTGCTTTGATTGGTAATGGACAAACATTCTTAGGAAGAGCGTATGGACCATTTTCTAGAGTCGTATTTTATGGAACATATTTTAGTTCAGTGGTTGCACCTGCAGGATGGAGTGCATGGGAATCAAATCTCGGTTTTGGCACGACGTACATTGAAGCTGACTGCAAAGGGCCAGGTGCTAATACTTCTGGGCGTGTACCTTGGTCGAAGAAGCTCCGTGGCTCAAAAATGGCTAAATATTCGAGATCATCCTTCATCGACCGAGATCGTTGGCTTTCATACTTGCCGGTGGCTTGGTGA 1002 0.4112 MEVLLFRAMILPLFLFFISSSWVCIVAQDCGRNQVTKTIVVDKSGRTGFITVQSAIDSIAENNNQWVKVRINAATYTEKVEIPYNKPCIYLEGEDRHSTIITYNDHQQTDISATFSSFPDNIIARSITFMNSYNLQRGKRRTQDSEVLPALAARIYGDKCVFYDCSFIGFQDTLWDVEGRHYFKDCTIEGAIDFIFGYGQSYYENCILNATSSGFVTAQGRSGKNDKSGFVFRGGALIGNGQTFLGRAYGPFSRVVFYGTYFSSVVAPAGWSAWESNLGFGTTYIEADCKGPGANTSGRVPWSKKLRGSKMAKYSRSSFIDRDRWLSYLPVAW* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0351 333 SUPERFAMILY Pectin lyase-like 35 331 IPR011050 -
Lan8g0351 333 Pfam Pectinesterase 39 321 IPR000070 GO:0030599|GO:0042545
Lan8g0351 333 PANTHER PECTINESTERASE 6 331 - -
Lan8g0351 333 ProSitePatterns Pectinesterase signature 2. 188 197 IPR033131 -
Lan8g0351 333 Gene3D - 32 332 IPR012334 -
Lan8g0351 333 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 6 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0351 Lan-Chr8 5551671 5554496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0351 6 277 Carbohydrate Esterase AT2G19150 44.286 4.37e-75 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0351 - - lang:109353850 533.102