Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0335 ATGTCTTCTGAAGCACTTATTCAACCGTCCGATGATGCAGTTGCATTCTCTGCTTCTCCTTCATCCAACCGTTATTGTTGGATTTTCGATGAATTGCCCAAAGCAACAATCGTATCTGTTTCTCGACCAGAAACTGGTGATATCAGTCCAATTCTTCTTTCTTACACTATAGAATTGCATTATAAACAGTTCAAGTGGCGTTTAAAGAAGAAAGCATCACAAGTTCTGTACTTGCAGTTCGCTTTGCGGAAACGTGCACTGATTGAAGAACTATATGATAAGCAAGGCCAGGTGAAAGAATGGCTTCAAAGTTTAGGAATAGGAGATCAAACGGTGATGATTCAAGATGATGAAGAACCGGATGATGGAGCTGTGCCTTTACACCATGAAGACAGTGTTAAAAACAGATATGTTCCATCTGTTGCTGCTCTTTCAATATTTCGTCCATCACTTGGAGGGCAGCAGTTAGTAGCAGATAGAGCAAAAGTCGCAATGCAGGGTTATTTGAATCTTTTTTTAGGAAACCTGGATATTGTGAATTCTCAAGAGGTCTGCAAGTTTTTGGAGATCTCCAAGCTATCCTTTTTACAGGAGTATGGTCCAAAACTAAGAGAGGGATACGTGACGGTTAAGCATCTGTCAAATATTTCACAGGATTCAGATGTGGGATGCTTTCCATGTAATTTGTTTGGATGTTGTGATAACAACTGGAAAAAGGTATGGGCTGTTTTGAAACCTGGATTTTTGGCCTTGCTGGATGATCCTTTCCACAACAAACTGTTGGATATAATTGTTTTCGATGTCCTCCCATCCTCAAATGGAGATAAAGGAACCCAAATACATTTAGCTGATCCTATAAAGGAAGGCAAACCTTTGTGTTACACTTTTAAGGTTACTAGTGGAAATAGGAGCATAAGGTTGAGAACTACCAGCAATGCCAAAGTTAATGCTTGGGTTACTGAAATTAATGAAGTTGGTCTAAGACCTCTAGAGGGTTGGTGTCATCCTCATCGCTTTGGTTCATTTGCTCCGGTGAGAGGTGTGACTAAAGATGGGAGCCAAGCACAATGGTTTGTAGATGGAAAGGCAGCATTTGAAGCAATTGCTTCTTCAATTGAAGATGCTAAGTCAGAGATCTTCATTACAGGATGGTGGCTTTGCCCCGAGCTATATCTAAGGCGACCTTTTCATAGCTCTTCTTCCTCCAGGCTAGACTCGTTACTAGAAAAGAAAGCTAAGCAAGGGGTTCAGATCTATGTGCTTCTTTACAAGGAAGTTTCTATAGCTTTGAAAATAAACAGCCTCTACAGTATGAGAAGGCTCCTCGACATTCACGAGAATGTGAGGGTATTGCGTTATCCTGACCATTTAGCATGTGGTGTGTATTTATGGTCCCACCATGAAAAACTTGTGATTATTGATTCTAAGATTTGCTATATTGGAGGATTAGATTTATGTTTTGGTCGATATGACACGCCTGAACATAAAGTGGGTGATTGCCCTTCTGTAATATGGCCTGGAAAGGACTATTACAACCCAAGAGAATCTGAGCCAAATTCATGGGAAGACACTATGAGAGATGAATTGGACCGTCAGAAATATCCCCGTATGCCATGGCATGATGTTCATTGTGTGCTGTGGGGACCTCCCTGTCGGGACATTGCTCGGCACTTTGTTCAACGCTGGAATCATGCTAAGAGAACCAAAGCTCCAAATGAAAGTGAAATTCCACTGCTTATGCCGCACCATCACATGGTTATCCCTCATTACTTGGGAAGAAGCAAAGAGAGAGAGATTGATGGAAAGAAAGATGAAGAAGACAACCGGAAAAAAATTGACAGACAGGACTCGTCTTCTTTACAGTCTCCATTGCAAGATATACCACTACTTTTACCTCAAGAAGCTGGTGGAGTAGTTACTTCAAATGAAAATCTCAAGTTAAATGGAAGCAACATGAACAATAATGTTGCTGATCATACAAGTTTAAGTGAAAATGTTCCATTATCATCCCAAAATCTGAAAGATGAAACTTTAGTTACAGACAATCAGATGAAAGGGTTTCAAGACAAAGTTGTTCCTTTTAACATGGGGGCACAATCTGTTCTTGATGAACTAGATGATTGGTGGGAAACACCAAAAGAGGGCACAAATGATAGTACTGCTTTGGAATATGGAGAAGTTGGTCCATGTACTACTTGTGAATGTCAGATTATCAGAAGTGTCAGTCAGTGGTCTGCTGGAACAAGTCAGCCCGAAGGAAGCATCCACACTGCATATTGTTCTCTTATTGACAAAGCAAAGCATTTTATTTACATTGAGAACCAGTTTTTCATATCAGGTCTTGCAGAGGACGACATAATACAGAACCGTGTATTGGAAGCACTATATAGGCGTATTTTGAGAGCCCACAAAGAAAAGAACATTTTTAGAGTTATAGTTGTTATTCCCCTCTTGCCTGGGTTCCAGGGTGGTATGGATGATGGTGGTGCTGCAACTGTGAGAGCCTTAACACATTGGCAGTATAGAACAATTTCTAGAGAAAAGCACTCCATATTACACAATCTTGAAGCTACACTTGGTCCAAAGGCACATGATTATATTTCTTTCTATGGTCTACGATCTCATGGTAGACTTTATGAGGATGGTCCTATAGCTACAAATCAGGTTTATGTGCACAGTAAACTGATAATAATAGATGACCGTGTAGCTTGTATTGGATCGTCTAATATAAATGACCGCAGTTTGCTTGGATTAAGAGACTCAGAGATCGGAGTGCTTATCGAAGACAAAGAATATGTTGACTCCTTAATGAATGGAAAGCCATGGAAGGCTGGGAAATTTTCCTATAGCCTCCGTTGCTCCCTATGGTCCGAGCACCTCGGTCTTCATACAGGGGAGATTAGTAAAATCAGTGATCCAGTGGCCGATATAACTTATAAGGACCTGTGGTCTGCAACTGCAAAGGAAAATACTAGGATATACCATGAGGTCTTCGCTTGTGTTCCCAATGATCACATACACTCCAGATCTGCGCTACGACAAAGCATGGCTCAATGGAAGGAAAAATTTGGCCATACCACCATGGATTTCGGAATAGCCCCTGATAAGTTAGTATGTCATGAGAATGGAGAAACCAAAGTGGTAGATCCTATAGATAGATTGAAGTCTGTAAAGGGACTTCTTGTTTCCTTTCCTCTGGAGTTCATGCGTGACGAAGATCTTAGACCGGCTTTTATCGAGAGCGAGTTCTACGTATCTCCTCAAGTATATCATTAA 3276 0.4084 MSSEALIQPSDDAVAFSASPSSNRYCWIFDELPKATIVSVSRPETGDISPILLSYTIELHYKQFKWRLKKKASQVLYLQFALRKRALIEELYDKQGQVKEWLQSLGIGDQTVMIQDDEEPDDGAVPLHHEDSVKNRYVPSVAALSIFRPSLGGQQLVADRAKVAMQGYLNLFLGNLDIVNSQEVCKFLEISKLSFLQEYGPKLREGYVTVKHLSNISQDSDVGCFPCNLFGCCDNNWKKVWAVLKPGFLALLDDPFHNKLLDIIVFDVLPSSNGDKGTQIHLADPIKEGKPLCYTFKVTSGNRSIRLRTTSNAKVNAWVTEINEVGLRPLEGWCHPHRFGSFAPVRGVTKDGSQAQWFVDGKAAFEAIASSIEDAKSEIFITGWWLCPELYLRRPFHSSSSSRLDSLLEKKAKQGVQIYVLLYKEVSIALKINSLYSMRRLLDIHENVRVLRYPDHLACGVYLWSHHEKLVIIDSKICYIGGLDLCFGRYDTPEHKVGDCPSVIWPGKDYYNPRESEPNSWEDTMRDELDRQKYPRMPWHDVHCVLWGPPCRDIARHFVQRWNHAKRTKAPNESEIPLLMPHHHMVIPHYLGRSKEREIDGKKDEEDNRKKIDRQDSSSLQSPLQDIPLLLPQEAGGVVTSNENLKLNGSNMNNNVADHTSLSENVPLSSQNLKDETLVTDNQMKGFQDKVVPFNMGAQSVLDELDDWWETPKEGTNDSTALEYGEVGPCTTCECQIIRSVSQWSAGTSQPEGSIHTAYCSLIDKAKHFIYIENQFFISGLAEDDIIQNRVLEALYRRILRAHKEKNIFRVIVVIPLLPGFQGGMDDGGAATVRALTHWQYRTISREKHSILHNLEATLGPKAHDYISFYGLRSHGRLYEDGPIATNQVYVHSKLIIIDDRVACIGSSNINDRSLLGLRDSEIGVLIEDKEYVDSLMNGKPWKAGKFSYSLRCSLWSEHLGLHTGEISKISDPVADITYKDLWSATAKENTRIYHEVFACVPNDHIHSRSALRQSMAQWKEKFGHTTMDFGIAPDKLVCHENGETKVVDPIDRLKSVKGLLVSFPLEFMRDEDLRPAFIESEFYVSPQVYH* 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0335 1091 PANTHER PHOSPHOLIPASE D 21 1088 IPR015679 -
Lan8g0335 1091 SUPERFAMILY Phospholipase D/nuclease 726 937 - -
Lan8g0335 1091 SUPERFAMILY Phospholipase D/nuclease 316 582 - -
Lan8g0335 1091 MobiDBLite consensus disorder prediction 591 629 - -
Lan8g0335 1091 Pfam Phospholipase D Active site motif 462 489 IPR001736 GO:0003824
Lan8g0335 1091 CDD PLDc_vPLD1_2_yPLD_like_1 355 500 - -
Lan8g0335 1091 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 462 489 IPR001736 GO:0003824
Lan8g0335 1091 SMART pld_4 887 914 IPR001736 GO:0003824
Lan8g0335 1091 SMART pld_4 462 489 IPR001736 GO:0003824
Lan8g0335 1091 CDD PH_PLD 179 325 - -
Lan8g0335 1091 CDD PLDc_vPLD1_2_yPLD_like_2 747 931 - -
Lan8g0335 1091 MobiDBLite consensus disorder prediction 591 616 - -
Lan8g0335 1091 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 887 914 IPR001736 GO:0003824
Lan8g0335 1091 Gene3D - 204 325 IPR011993 -
Lan8g0335 1091 ProSiteProfiles PH domain profile. 201 327 IPR001849 -
Lan8g0335 1091 Gene3D Endonuclease Chain A 347 585 - -
Lan8g0335 1091 SMART PH_update 202 329 IPR001849 -
Lan8g0335 1091 Gene3D Endonuclease Chain A 710 950 - -
Lan8g0335 1091 SUPERFAMILY PH domain-like 203 325 - -
Lan8g0335 1091 PIRSF PLD_euk 35 602 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lan8g0335 1091 PIRSF PLD_euk 589 1091 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lan8g0335 1091 PANTHER PHOSPHOLIPASE D ZETA 2 21 1088 - -
Lan8g0335 1091 Pfam PLD-like domain 760 934 IPR025202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0335 Lan-Chr8 5378851 5388588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0335 28 1091 Phospholipase D Gene Family (Wang group) AT3G05630 65.051 0.0 1403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0335 K01115 - gmx:100796914 1847.02