Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0333 ATGTCTGGAGGAGGTGAAGAAAAGCGAAAAAGAATTGTTATTATTGGTTTCTCTACCCTTTTATTGGTGGCTATGATTGTTGTTGTTATTATGGGTATAAGTAATGAAACTGAATTCAACGATGATAATGATGATGATATAGAGGATAACCAAAAACATGTTGCATCAACAATGAAAGCAGTGAAAACCCTTTGTTATCCCACAGATTATAAGAAAGAATGTGAGGAAAATCTCATGCCAGCAGCTGGTAACACAACAGATCCAAAAGAACTTGTTAAAATTGCTTTCAACGTTGCCATTTCCAGAATTGGTGATAAATTGAAGCAGACAGAAATTTTGCATGAGCTTGAGAATGAGCCAAGAGCCAAGTTGGCACTTGAAACATGCAAGCAACTCATGGATCTTTCAATTGATGAGTTTCTAAGGTCACTTGATCAAATAAGAGAGTTTGATCTCATAAATGTTGACAAAATCTTCACAAGTGTAAAGGTTTGGCTCAGTGGTGCAATCACATACCAAGATACATGCTTAGATGGATTTGAAAACACTACAAGCGAAGCAAGTAAGAAAATGAAGGATTTGTTAACCACAAGCATGCACATGAGTAGCAATGCTCTTGCTATTATCACCAACATGGCTGATACCATTGCAGATTGGAATGTTACAAGATTACTAGGTGGTCGTCGCCTCCTTGAGGAATCTAAGAATGAAAACAGTTTCAATCTTCCAACATGGGTTGATGATGCTGCTAGTGTACACAAGATTCTTGCAGAAACTCCATTCAAAATCAAGCCTAATGTGACTGTAGCCTTGGATGGCACTGGTGATTTCAAGAGCATTAATAAGGCATTGAAAAAGGTTCCTAGTGATAATGAAAAGCCATTCGTGATCTACATCAAGAAAGGTATTTACCATGAGTATGTTCATGTTACCAAGGATATGACCAATGTGGTGTTTATTGGTGATGGTGGTGATAAGACAAGAATCACTGGCAACAAAAACTTCATAGATGGGGTTAACACCTACAACACAACCACTGTTGCTATTCAAGGAGATCACTTTATTGCCATTAACATGGGGTTTGAGAACTCAGCTGGACCCCACAAGCATCAAGCAGTGGCCATTAGAGTCCAAGCAGACAAGTCCATCTTCTACAAATGCCAATTTGATGGTTACCAAGACACTCTTTATGCTCACACCCACCGTCAGTTCTATAGGGATTGCATCATTTCAGGTACCATTGACTTCATCTTCGGTGATGCTATTGCTGTATTCCAGAACTGCACATTTATTGTGAGAAAACCAATGAGCAACCAAAACTGCATTGTTACCGCACAAGGCAGAAAAGACAGACACCAACCTACAGGAATAGTCATTCAAGGAGGTTCCATTGTTGCTGATCCTATGCTCCAGGCTGCAAAGTTGGACCATAAATCCTACCTTGCACGCCCATGGAAGAATTTCTCAAGAACCATCTTCATGGATACATTCATTGATGGGTTCATTGATCCTGAAGGGTTTTTGGCATGGCAAGGAGAACAGGGTCCTATGCATATGAACACTTGTTTCTATTCTGAGTATCACAACTATGGTCCTGGTTCTGATAAATCAAAGCGTGCACATTGGGCTGGAATCTGGAACCTGAATTCAAAGGCAGCACATTTGTTCCAACCATCAAAGTTCTTTCATGGAGATGATTGGATTGAAGATGCTGGTATTCCTTACTTCTCTGGCATTCCCAAACATTACAGGCACAAAATGACAGTACGCAATTGGTTACCTGAAAAAGAAGACAAAGAGGACAAAAAAAACTAG 1815 0.3967 MSGGGEEKRKRIVIIGFSTLLLVAMIVVVIMGISNETEFNDDNDDDIEDNQKHVASTMKAVKTLCYPTDYKKECEENLMPAAGNTTDPKELVKIAFNVAISRIGDKLKQTEILHELENEPRAKLALETCKQLMDLSIDEFLRSLDQIREFDLINVDKIFTSVKVWLSGAITYQDTCLDGFENTTSEASKKMKDLLTTSMHMSSNALAIITNMADTIADWNVTRLLGGRRLLEESKNENSFNLPTWVDDAASVHKILAETPFKIKPNVTVALDGTGDFKSINKALKKVPSDNEKPFVIYIKKGIYHEYVHVTKDMTNVVFIGDGGDKTRITGNKNFIDGVNTYNTTTVAIQGDHFIAINMGFENSAGPHKHQAVAIRVQADKSIFYKCQFDGYQDTLYAHTHRQFYRDCIISGTIDFIFGDAIAVFQNCTFIVRKPMSNQNCIVTAQGRKDRHQPTGIVIQGGSIVADPMLQAAKLDHKSYLARPWKNFSRTIFMDTFIDGFIDPEGFLAWQGEQGPMHMNTCFYSEYHNYGPGSDKSKRAHWAGIWNLNSKAAHLFQPSKFFHGDDWIEDAGIPYFSGIPKHYRHKMTVRNWLPEKEDKEDKKN* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0333 604 CDD PMEI-like_3 63 213 - -
Lan8g0333 604 Pfam Plant invertase/pectin methylesterase inhibitor 60 208 IPR006501 GO:0004857
Lan8g0333 604 SUPERFAMILY Pectin lyase-like 264 578 IPR011050 -
Lan8g0333 604 PANTHER PECTINESTERASE 12 580 - -
Lan8g0333 604 TIGRFAM PME_inhib: pectinesterase inhibitor domain 56 212 IPR006501 GO:0004857
Lan8g0333 604 Pfam Pectinesterase 266 565 IPR000070 GO:0030599|GO:0042545
Lan8g0333 604 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 213 IPR035513 -
Lan8g0333 604 Gene3D - 260 579 IPR012334 -
Lan8g0333 604 SMART PMEI_2 56 208 IPR006501 GO:0004857
Lan8g0333 604 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 212 IPR035513 -
Lan8g0333 604 ProSitePatterns Pectinesterase signature 2. 410 419 IPR033131 -
Lan8g0333 604 PANTHER PECTINESTERASE 12 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0333 Lan-Chr8 5359483 5361894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0333 6 579 Carbohydrate Esterase AT3G05610 47.478 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0333 K01051 - gmx:100776244 863.603