Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0329 ATGACCGGAGGAAATGAAGGGAAGAAGAATAGGATAGCAATTATAAGCGTCTCCGCCTTCTTACTGGTGGCTATGGTTGTCGCCGTCACCGTCGGATTCAACTACAGTAAGGATGGTTTTGAGGATGATGGTCTAGAGGATAACCAGAGACACCATATAACTTCAACAGCAAAAGCAGTGAAAACCCTTTGTGCTCCCACTGATTACAAGCAAGAATGTGAGGAAAGTCTCATTCCAGCAGCTGGCAACACCACAGATCCAAAAGAACTTGTTAAGATTGCCTTCAACATAACTATTACCAAGATCAGTGATAAGTTCAAGGAGACTAATATCTTGCATGGTCTTGAGAAGGAGCCAAGATCCAAGTCTGCACTTGAGACATGTAAACAACTCATGGATCTTTCCATTGGGGAGTTTATAAGGTCACTTGAGACTATTAGTGACTTTAACCTCACTAATCTTGATGAAATTCTCGGCAATTTAAAGGTTTGGCTCAGTGGTGCAGTCACATACCAAGATACTTGCTTAGATGGATTTGAAAACACTACAAGTGAAGCAAGTAAGAAAATGAAGGAGTTGTTAACTACAAGCATGCACATGAGTAGCAATGTTCTTGCCATTATAACTGAAATGGCTGACACAGTTACAGATTGGAATGTTACAAGATTACTAGGTGGTCGTCGCCTCCTTGAGGAATCTAAGAATGAAAACAGTTTCAATCTTCCAACATGGGTTGATGATGCTGCTAGTGTACACAAGATTCTTGCAGAAACTCCATTCAAAATCAAGCCTAATGTGACTGTAGCCTTGGATGGCACTGGTGATTTCAAGAGCATTAATAAGGCATTGAAAAAGGTTCCTAGTGATAATGAAAAGCCATTCGTGATCTACATCAAGAAAGGTATTTACCATGAGTATGTTCATGTTACCAAGGATATGACCAATGTGGTGTTTATTGGTGATGGTGGTGATAAGACAAGAATCACTGGCAACAAAAACTTCATAGATGGGGTTAACACCTACAACACAACCACTGTTGCTATTCAAGGAGATCACTTTATTGCCATTAACATGGGGTTTGAGAACTCAGCTGGACCCCACAAGCATCAAGCAGTGGCCATTAGAGTCCAAGCAGACAAGTCCATCTTCTACAAATGCCAATTTGATGGTTACCAAGACACTCTTTATGCTCACACCCACCGTCAGTTCTATAGGGATTGCATCATTTCAGGTACCATTGACTTCATCTTCGGTGATGCTATTGCTGTATTCCAGAACTGCACATTTATTGTGAGAAAACCAATGAGCAACCAAAACTGCATTGTTACCGCACAAGGCAGAAAAGACAGACACCAACCTACAGGAATAGTCATTCAAGGAGGTTCCATTGTTGCTGATCCTATGCTCCAGGCTGCAAAGTTGGACCATAAATCCTACCTTGCACGCCCATGGAAGAATTTCTCAAGAACCATCTTCATGGATACATTCATTGATGGGTTCATTGATCCTGAAGGGTTTTTGGCATGGCAAGGAGAACAGGGTCCTATGCATATGAACACTTGTTTCTATTCTGAGTATCACAACTATGGTCCTGGTTCTGATAAATCAAAGCGTGCACATTGGGCTGGAATCTGGAACCTGAATTCAAAGGCAGCACATTTGTTCCAACCATCAAAGTTCTTTCATGGAGATGATTGGATTGAAGATGCTGGTATTCCTTACTTCTCTGGCATTCCCAAACATTACAGGCACAAAATGACAGTACGCAATTGGTTACCTGAAAAAGAAGACAAAGAGGACAAAAAAGAAGACAAAAAGGACAAAGAAGAAAAATCTAGTCGCCGTTAA 1848 0.4118 MTGGNEGKKNRIAIISVSAFLLVAMVVAVTVGFNYSKDGFEDDGLEDNQRHHITSTAKAVKTLCAPTDYKQECEESLIPAAGNTTDPKELVKIAFNITITKISDKFKETNILHGLEKEPRSKSALETCKQLMDLSIGEFIRSLETISDFNLTNLDEILGNLKVWLSGAVTYQDTCLDGFENTTSEASKKMKELLTTSMHMSSNVLAIITEMADTVTDWNVTRLLGGRRLLEESKNENSFNLPTWVDDAASVHKILAETPFKIKPNVTVALDGTGDFKSINKALKKVPSDNEKPFVIYIKKGIYHEYVHVTKDMTNVVFIGDGGDKTRITGNKNFIDGVNTYNTTTVAIQGDHFIAINMGFENSAGPHKHQAVAIRVQADKSIFYKCQFDGYQDTLYAHTHRQFYRDCIISGTIDFIFGDAIAVFQNCTFIVRKPMSNQNCIVTAQGRKDRHQPTGIVIQGGSIVADPMLQAAKLDHKSYLARPWKNFSRTIFMDTFIDGFIDPEGFLAWQGEQGPMHMNTCFYSEYHNYGPGSDKSKRAHWAGIWNLNSKAAHLFQPSKFFHGDDWIEDAGIPYFSGIPKHYRHKMTVRNWLPEKEDKEDKKEDKKDKEEKSSRR* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0329 615 Pfam Pectinesterase 265 564 IPR000070 GO:0030599|GO:0042545
Lan8g0329 615 MobiDBLite consensus disorder prediction 593 615 - -
Lan8g0329 615 PANTHER PECTINESTERASE 10 579 - -
Lan8g0329 615 Gene3D - 259 578 IPR012334 -
Lan8g0329 615 Pfam Plant invertase/pectin methylesterase inhibitor 59 207 IPR006501 GO:0004857
Lan8g0329 615 CDD PMEI-like_3 62 212 - -
Lan8g0329 615 SUPERFAMILY Pectin lyase-like 263 577 IPR011050 -
Lan8g0329 615 TIGRFAM PME_inhib: pectinesterase inhibitor domain 56 211 IPR006501 GO:0004857
Lan8g0329 615 PANTHER PECTINESTERASE 10 579 - -
Lan8g0329 615 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 211 IPR035513 -
Lan8g0329 615 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 212 IPR035513 -
Lan8g0329 615 Coils Coil 595 615 - -
Lan8g0329 615 ProSitePatterns Pectinesterase signature 2. 409 418 IPR033131 -
Lan8g0329 615 SMART PMEI_2 55 207 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0329 Lan-Chr8 5331058 5333895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0329 8 578 Carbohydrate Esterase AT3G05610 48.862 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0329 K01051 - gmx:100776244 879.011