Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0319 ATGGCCACAAACAGATTCTTATGTGAAATCTGCAATAAAGGGTTCCAAAGAGACCAAAACCTTCAATTGCACCGACGAGGCCATAATTTACCATGGAAACTTAAACAGAGAACAAGCACAGAAATTATAAAAAGGGTTTATGTTTGTCCTGAACCTTCATGTGTGCACCATAATCCAGCAAGAGCATTAGGTGATCTTACTGGCATTAAAAAGCACTTTTGTAGAAAGCATGGTGAGAAGAAGTGGAAATGTGATAAGTGCTCAAAGAAATATGCTGTTCAATCTGATTGGAAAGCTCATTCAAAAATCTGTGGTACAAGGGAGTACAAATGTGACTGTGGCACCCTCTTTTCAAGAAGAGATAGCTTCATTACCCACAGAGCTTTCTGTGATGCACTGGCTGAGGACAACAAAGGCAATGAAGAACAATTGTCAAAGATGGGTTCAAACTTGCAATGCCAACCAATGCCAAATTTGGTTCCCTCATTACCAATCAATACCAACATAATCCCCAACCCACAAGTTGGAGGGACAACATCAGAATTCAACAACCATTCAGATCAAAGGCATAATCCATTATCATCACTGCCAAATCCTGCAACTTCAAAACCCTTCAACAATAATATGGAAATGAGGAACACTTGTCCCTCTCTTCATCTGAGTTCAAACCTTTTAGCTTCTCATGAAGGCTCATCACTCATGTCTGCCACTGTGTTGCTGCAAAAGGCTGCTCAAATGGGTGCAACTCTGAGTAATAATAATAGCAACATTGCTACAACCATGGCACCACTATCATTTGGTAGTATGGTGCAATTGCAACAACAACAACAACCAGATAGTGTTCACTCCTTCATGAACCACTACATGCAACAACAACAACAGGATCATGTTTCATCTCAGTATAATAATTTCAATGCAAATCATGATATGAGTACCGGTGATAATGAAGGTAGTGTTGCTGGAATGAATGGTGTGGATATGTTTAATGTTATATATGATCAAAGTAAGGCGTTGTCAAAGATCATAGAGCAGAATAATAGAAGCATAAACAGTGGAGTTTTGCATCAAAAAAATGGTGGGTCAAGTAGTGGTGCAACTAGCATTGGTGGAAGTAAAGGAAGTGGTGATGTAATGACTCTAGATTTGTTGGGAACTGGAGGTGGTGGTGATAGGAATTTGAATATCTATGATGGTGCACAACATGCTGAAACTTCTGCAGAAGATGAGGTTTGGAGAAATTGGTCAAACAAGAATGAGGACTTTGAATCATTTTCAGCATCTAGCAGCATGTGA 1293 0.3944 MATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSTEIIKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEDNKGNEEQLSKMGSNLQCQPMPNLVPSLPINTNIIPNPQVGGTTSEFNNHSDQRHNPLSSLPNPATSKPFNNNMEMRNTCPSLHLSSNLLASHEGSSLMSATVLLQKAAQMGATLSNNNSNIATTMAPLSFGSMVQLQQQQQPDSVHSFMNHYMQQQQQDHVSSQYNNFNANHDMSTGDNEGSVAGMNGVDMFNVIYDQSKALSKIIEQNNRSINSGVLHQKNGGSSSGATSIGGSKGSGDVMTLDLLGTGGGGDRNLNIYDGAQHAETSAEDEVWRNWSNKNEDFESFSASSSM* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0319 430 MobiDBLite consensus disorder prediction 352 372 - -
Lan8g0319 430 MobiDBLite consensus disorder prediction 175 200 - -
Lan8g0319 430 Gene3D Classic Zinc Finger 61 139 - -
Lan8g0319 430 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 28 IPR013087 -
Lan8g0319 430 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Lan8g0319 430 Gene3D Classic Zinc Finger 2 29 - -
Lan8g0319 430 SMART c2h2final6 47 77 IPR013087 -
Lan8g0319 430 SMART c2h2final6 82 102 IPR013087 -
Lan8g0319 430 SMART c2h2final6 6 28 IPR013087 -
Lan8g0319 430 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 1 407 - -
Lan8g0319 430 SUPERFAMILY beta-beta-alpha zinc fingers 5 102 IPR036236 -
Lan8g0319 430 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0319 Lan-Chr8 5270798 5273373 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0319 1 251 IDZ Gene Family AT3G50700 55.326 5.02e-96 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan8g0319 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0319 - - lang:109354363 849.351