Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0313 ATGAACGATCTAACCATTCAAACTGAAATTCTCAATCCGTTACTTCTTCAATGTGATCTCGAGGATCACCCTTATTCAATCGCACCCTCAGAAGTTGTACCAAATCAATTGAGCGAAAACCCTAACTGCATCGGGTCTGAAAACATTATGTCGAATGAAATTCACGAAAATTCTCCTGATCAAGGTCACGGTACAGTTCCAATCTCGAAGAAGATTCTTTACTTGAGTACCATAGTTCAGGATTTGAAGAATCAGCATTTAGCCTTATCTGATGAAGTGAAACTCACCATTGAATCCTTTCCCGGCCCTGATTTTTTGAAGTCTGTTCAGCTTCTAGGTTCTGAAAATGATCTGTTGAAACGAAAGCTCCTGGTGGAGTCCTCCGAGCGTAGACACCTTTACAATGAAGTAATTGAACTGAAAGGAAATATTAAAGTTTTCTGCAGATGTAGACCATTAAATGAAAGTGAAATTGCAAACGGGTCTGCATCTGTGGTGAATTTTGAGTCTCTTCCTGATAATGAACTTCAAGTCATTTGCTCGGATTCATCCAAGAAGCAATTTAAATTTGATAACATATTTAGGCCTGAAGATAACCAAGAAGCTGTTTTTGCACAAACAAAACCTATAGTTACATCAGTATTGGATGGGTTTAATGTCTGTATATTTGCCTATGGGCAAACTGGAACTGGGAAAACATTTACAATGGAGGGCACACCAGAACAAAGAGGAGTTAACTATAGAACCCTGGAGGAACTATTTCGGTTAACTGAAGAGAGACATGGCATAACCAAGTATGAGTTACGTGTTAGCATGTTGGAGGTCTACAATGAGAAGATAAGAGATCTCCTGGCAGAAAATTCTAGCCAACCGACAAAGAAGTTGGAGATAAAGCAAGCTGCAGATGGAACCCAAGAAGTCCCAGGACTTATTGAAGCTCCTGTTAATGGAACAGAAGATGTGTGGGAAATACTCAAAGTAGGAAATGGAGTCAGGTCGGTGGGGTCTACCTGTTCTAACGAGCTTAGCAGCCCTTCTCACTGCTTGTTGCGAGTAACTGTTGTTGGGGAGAGTTTAATCAATGGCCAGAAAACAAAGAGCCGCCTTTGGCTAGTAGACTTAGCTGGAAGTGAGCGTGTGGGAAAAACTGAAGCTGAAGGAGAAAGACTGAAGGAGTCTCAATTCATAAATAAGTCTCTTTCCGCACTCGGTGATGTTATTTCTGCCCTTGCTTCAAAATCAGCTCACATCCCTTACCGAAACTCGAAGCTCACTCACATACTGCAAAGCTCATTAGGAGGAGATTGCAAAACATTGATGTTTGTGCAGGTGAGTCCAAGCACAGCAGACTTGGGAGAAACACTTTGTTCATTGAATTTTGCCACCCGGGTCCGCGGAATTGAGAGTGGCCCAGCTCGGAAGCAAGTAGACCTCACCGAGCTGTTAAAGTACAAGCAAATGGCAGAAAAGGCCAAACATGATGACAAGGAAACTAGGAAGTTACAAGATAACTTGCAAAACTTGCAACTCAGGCTTGCTGCAAGAGATTATCATTGTAAAAACCTTCAGGAAAAGGTTCGGGACCTTGAGAACCAAATAGCAGAAGAGAGAAAAACCAGACTAAAGCAAGAAAGTAGGTCACTTGCTGCTGTTTCTGCTCAACCCTCGTCATCAAAACAAACAGCAGTTCAGAAAATCATAACAAATAAGAAGCCACCATTGAATCCTTCAAAATCAAGGCCGCCACTAAGAAGAATAACTAATCTCTTGCGTCCATCATCTCCTCTAACTTCGAAGAGATATACTGCTGCCATGAATGGAAAGGAAAACACTGTCAGAAGAAGGAATTCAATGACAACAAACACAGAAAGCTTTGCAAAACCAAGAGGCAGGGCATCCATTGCGGTGCCAGTGAGACCACCTGCATCATCAACAACAACACAGATCCTTCAACCAAGGAGGAGGGTCTCCATTGCTGCACTTCATCCTGACACAGCTTATGACATGACAACTCCACTACGTACCTCACCCTCTCGACCATCTGCTGCACCAACCCAGGTCCTTCAGCCAAGGAGGCGGGTCTCAGTTGCTACAATCCGTTCAGACACAACTTATGACATCAAAACACCACTGCGTACCTCAGCCTCTCAATTTAATAGTGGGATCGGTTTACAGCAATCATTGAAGAATAACCAAAGGAAAGATCGGTATTCAAGTTTGTTCGCTCAATATTCAGAGTTGAGAGCTTCATCAGTTGAGACAACGCCAATGTCTATTGGGAGCAGCAGCAAGTTTAGGGGCAGTCCAGTACGGGCAGATTCGCGGTTGGCTAGGCATCCAACTGGCCTTGCACTGCAAAGGAAACCTTTAGTGTGGAGTCCCCTTAAGCTGAAAGCCTCGAAAAATAACAGAAAGTTGCTCTGGCCATCTCGGCCTTACACTGAAATGCAGTGA 2454 0.4328 MNDLTIQTEILNPLLLQCDLEDHPYSIAPSEVVPNQLSENPNCIGSENIMSNEIHENSPDQGHGTVPISKKILYLSTIVQDLKNQHLALSDEVKLTIESFPGPDFLKSVQLLGSENDLLKRKLLVESSERRHLYNEVIELKGNIKVFCRCRPLNESEIANGSASVVNFESLPDNELQVICSDSSKKQFKFDNIFRPEDNQEAVFAQTKPIVTSVLDGFNVCIFAYGQTGTGKTFTMEGTPEQRGVNYRTLEELFRLTEERHGITKYELRVSMLEVYNEKIRDLLAENSSQPTKKLEIKQAADGTQEVPGLIEAPVNGTEDVWEILKVGNGVRSVGSTCSNELSSPSHCLLRVTVVGESLINGQKTKSRLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQVSPSTADLGETLCSLNFATRVRGIESGPARKQVDLTELLKYKQMAEKAKHDDKETRKLQDNLQNLQLRLAARDYHCKNLQEKVRDLENQIAEERKTRLKQESRSLAAVSAQPSSSKQTAVQKIITNKKPPLNPSKSRPPLRRITNLLRPSSPLTSKRYTAAMNGKENTVRRRNSMTTNTESFAKPRGRASIAVPVRPPASSTTTQILQPRRRVSIAALHPDTAYDMTTPLRTSPSRPSAAPTQVLQPRRRVSVATIRSDTTYDIKTPLRTSASQFNSGIGLQQSLKNNQRKDRYSSLFAQYSELRASSVETTPMSIGSSSKFRGSPVRADSRLARHPTGLALQRKPLVWSPLKLKASKNNRKLLWPSRPYTEMQ* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0313 817 Gene3D Kinesin motor domain 138 510 IPR036961 -
Lan8g0313 817 Coils Coil 519 546 - -
Lan8g0313 817 ProSiteProfiles Kinesin motor domain profile. 143 467 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan8g0313 817 PANTHER KINESIN-LIKE PROTEIN KIN-14S 81 672 - -
Lan8g0313 817 SMART kinesin_4 141 475 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan8g0313 817 CDD KISc_C_terminal 141 468 - -
Lan8g0313 817 PANTHER KINESIN-RELATED 81 672 IPR027640 GO:0003777|GO:0007018
Lan8g0313 817 MobiDBLite consensus disorder prediction 668 691 - -
Lan8g0313 817 MobiDBLite consensus disorder prediction 669 685 - -
Lan8g0313 817 MobiDBLite consensus disorder prediction 539 562 - -
Lan8g0313 817 MobiDBLite consensus disorder prediction 545 562 - -
Lan8g0313 817 PRINTS Kinesin heavy chain signature 217 238 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan8g0313 817 PRINTS Kinesin heavy chain signature 337 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan8g0313 817 PRINTS Kinesin heavy chain signature 368 386 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan8g0313 817 PRINTS Kinesin heavy chain signature 417 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan8g0313 817 Pfam Kinesin motor domain 149 467 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan8g0313 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 501 IPR027417 -
Lan8g0313 817 ProSitePatterns Kinesin motor domain signature. 367 378 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan8g0313 817 Coils Coil 491 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0313 Lan-Chr8 5219837 5224091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0313 130 495 Calmodulin-binding Proteins AT5G65930 41.019 1.03e-75 266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0313 8 5219837 5224091 Lan20g0652 20 5168500 5172892 LSH