Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0304 ATGGGGAGTGACGGTGACGCTACCCGGACATATTATTGTTTATGGGTCAATAAGAAAAGCTCTGCTAATAAATCACAAAAGGTCCAAACAGGAGAGTCTTCTAACAAGAGAATAGGATCTCTATTTTCTTGCCCTGCTTCTGCCCAAGATTTGAGACAGCTTGACTTGGAGAAAGAGAAAGAAGACGAGGCATCTCCGAGGGGAGTCTTGGAATCATGCATTAGAGACTTTGAACCTGAGCACCAACCAGATGAATCGGAGACCAGTTGTTCAAGTCCGAGGGCACAATCACATTGGGGCAATTTTTTCAAACTGTGGAAAAAAAGATCATTGAAGCGCCTGCCGTCGTCCTTGCAAACATTGCCCTCTATTGGTGTGCCAAAGCTACCAAAGTGGAAAAGCAAAAGCACTAGGGAAAATCATTCTCTAAATAATCTCTACAACTTCAGGTCTTCGTTGGTGACTTTTAGCCTCTCTGAACTGAGAAATGCAACCAATAATTTTAGCAATGAAAATATAATTGGAAGAGGTGGTTTTGCGGAGGTTTTCAAGGGTCGTCTCCAAGATGGGCAACTAATAGCAGTGAAGAAACTTACTAAAGGGACTACTGAAGAAATGATAGCCGGCTTTCTATCTGAGCTTGGCGTTATCGCTCATGTTGACCATCCTAATACTGCCAAGCTTATTGGATGTGGTGTAGAAGGAGGAATGCACCTTGTCTTCGAACTATCTACACTCGGATGTCTAGGATCTCTTCTTCATGGTCCTGATAAAAACAAATTGGATTGGAGCAAAAGGTACAACATTGCTCAGAAAATAGCTGATGGCCTCCTCTACCTGCATGAGAGTTGTCACCGGCGGATTATTCACAGAGATATCAAGTCAGAGAATATTCTGCTCACTGAGAGTTTTGAGCCACAGATTTGTGATTTTGGGCTTGCAAAGTGGTTACCTGAAGATTGGACTCACCATAATGTATCGAAGTTTGAAGGCACATTCGGGTATTTTGCTCCTGAATATTGCATGCATGGCATTGTAGATGAGAAAACAGATGTTTATTCTTTTGGGGTCCTACTTTTGGAGATCATAACTGGGCACCCTGCTTTGGATCATATGCAGCAGAGTGTTCTGATATGGGCAAAACCTTTGCTAGATACTAATAATATCAAAGAGCTTGTTGATCCTTCTCTTGGCGATGATTATGACCAAGAACAAATGGACCATGTTGTTCTGACTGCATCGCTGTGTGTTGACCAGTCCCCTATACTGCGCCCCCGTATGAGTCAGGTTGTAACACTGCTAAGAGGTGATAAGTGTGTCACTGGATCTAAAAGATCATACCAAAGGAGGCCTTACCCAAGAACATACTCAGAAGAGCTACTAGATGTACAAGAATACAACTCAACAAAATATCTGAGAAATCTCAATCGAATGAAGCAGGTGTTAGATGACCTTTGA 1458 0.4246 MGSDGDATRTYYCLWVNKKSSANKSQKVQTGESSNKRIGSLFSCPASAQDLRQLDLEKEKEDEASPRGVLESCIRDFEPEHQPDESETSCSSPRAQSHWGNFFKLWKKRSLKRLPSSLQTLPSIGVPKLPKWKSKSTRENHSLNNLYNFRSSLVTFSLSELRNATNNFSNENIIGRGGFAEVFKGRLQDGQLIAVKKLTKGTTEEMIAGFLSELGVIAHVDHPNTAKLIGCGVEGGMHLVFELSTLGCLGSLLHGPDKNKLDWSKRYNIAQKIADGLLYLHESCHRRIIHRDIKSENILLTESFEPQICDFGLAKWLPEDWTHHNVSKFEGTFGYFAPEYCMHGIVDEKTDVYSFGVLLLEIITGHPALDHMQQSVLIWAKPLLDTNNIKELVDPSLGDDYDQEQMDHVVLTASLCVDQSPILRPRMSQVVTLLRGDKCVTGSKRSYQRRPYPRTYSEELLDVQEYNSTKYLRNLNRMKQVLDDL* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0304 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Lan8g0304 485 Gene3D Transferase(Phosphotransferase) domain 1 246 450 - -
Lan8g0304 485 PANTHER OS08G0249100 PROTEIN 42 480 - -
Lan8g0304 485 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 42 480 - -
Lan8g0304 485 Gene3D Phosphorylase Kinase; domain 1 130 242 - -
Lan8g0304 485 MobiDBLite consensus disorder prediction 21 40 - -
Lan8g0304 485 SUPERFAMILY Protein kinase-like (PK-like) 141 434 IPR011009 -
Lan8g0304 485 ProSiteProfiles Protein kinase domain profile. 168 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0304 485 ProSitePatterns Protein kinases ATP-binding region signature. 174 197 IPR017441 GO:0005524
Lan8g0304 485 SMART serkin_6 168 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0304 485 Pfam Protein tyrosine and serine/threonine kinase 171 432 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0304 Lan-Chr8 5123116 5128125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0304 153 480 Receptor kinase-like Gene Family AT1G53420 41.543 7.77e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan8g0304 PK_Tyr_Ser-Thr 7.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0304 - - cam:101512181 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0304 8 5123116 5128125 Lan20g0671 20 5339766 5344431 LSH