Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0300 ATGAATTTTGATATCAATCCACACATGGAATGCAATAAAGATGAGGCTACGAAGGCTAAGCAAATTGCTGAAAGTAGAATGCAAAGTGGTGACTTTGTAGAAGCACTGAAGTTTGCTGTGAAGGCTAAAAAATTGTATGCTGATGTTGAAAACATTGCTAAAATTCTTACAGTTTGTGAGGTTCATAGTGCTGCACAGAACAAATTATCTGGATCTGGCATGGACTGGTATGGAATTCTTCAAGCTGAACGATTTTCTGATGAAGCCACCTTGAAGAAGCAGTACAGGAGGCTTGCACTACTACTTCATCCTGATAAAAATAAATTTGCTGGTGCAGAAGCTGCTTTCAAATTGATTGGAGAAGCCAATAGGGTGTTGAGTGACCGAACAAATCGTTCTTTATATGAGATGAATTGTGGAGTCTCTATGAAAACTGCAGTGCCTAAGACCTCATCCCATCACTCAAATTATCAGAATAAATCTTATTCAAACCCCTCTTTTGCTTTTTTGAATGTGTTTCAGCAAGCTGGACAAGAGACATTCTGGACATCTTGTAAACATTGCAATACTAAATTCCAATACTACAAAGTCTACGTAAATGCAAGCTTACTTTGCCCAAAATGTTTGAAATCCTTTATAGCTCTTGATTTGGGGCACCAGGGTGTCCCACCAGGACATACTTGGAAATCATTTAATAACCAAAAAGAGACTCCGAGGTATGCTCCACCAAAACCACCCTCAGAGGTTAATCGTGAAAAAACCCTTGGTGGAGGACATGCTCATAAGTTTGCTCCGTCACACCCTGCATCTATGGGAAAAAGAGCTGCTGGAGTTGGCAGGCATTGTAAAGGTGAACAGAGTAAAGATGGATATGTGGCTAGAGGTGTGGCAAAGGGTAAGGTTCATAAATATAAAGCCATGGGGCCACGAAACTCAGCAAATGTTGGAAGTAAAAGAGTAAGGCAGTCAATACCAGATTCAAGAGAAAATTTCGATGCTGGAAATGGTGATGACATGAAAGATGCCAATGTCCAAGAAAATGTTGTTGATCCTTCTAGAATTAATGCTAGGAGATCTTCCAGGAAAAAGAAGCATGTTTCATATGCAGAAGCTGATGTTTTTGAAAGTACTTCCAAAAAGCCACGACCAAATGAATCATTTAACAACAATCAAGTTGAGGAAATGAAAGAGCCTGCAAGTGGTGTTGGGCTTTTGAATAACAATAATCCAGTTAGTTTTGCTGCTGCTGCGGGTGATCAAAACAGAGAGATGGGAAATCAAGTAAGTCGTCCACCTGAAGGAACATCTTTAAGCAATAAAAGCAAAATTGACCATGTTCAAGGAGAGGGGCTGTCCAAGTCAGAAGATGTTGATGTTAGAATGTCAAAAGTGGACAATTGCTCTCCGTTGAATTCAAATGCCCCTTCTGGTCCAGATATTCAATGTCTTGATGCTGATTTTAGTGATTTTGAGAAGGATAAGGCTGAAAGTTGTTTTGCTGTCAATCAATGCTGGGCTATTTATGATGATGCTGATACTATGCCAAGGTTTTATGCTCTTGTCAAGAAAGTGACCTCCCCTTTCAAAGTGCAGATTACTTGGTTGGAACCTGACCCAGATGATGAAGGTGAGATAAGTTGGTTTGATGCAGATTTGCCTATTGGTTGTGGTAAGTTCAAACTTGGTGGTTCTCAGAAAACTGGAGACCGTGCTTTGTTCTCTCATCAAATGCATTGTATAAAAGGAAGTGGCAAAGGGTCTTATCTGGTATGTCCTAAGAAGGGAGAAACGTGGGCAATTTTCAGAGATTGGGATATCAAATGGAATTCTGATCCAGAAAAGCATTTGAAGTATGAATTTGACTACGTGGAAATCTTATCCGATTTTACTGAGACTATTGGCATTGAAGTTGCTTATCTTGGCAAAGTGACAGGGTTTGTTAGCCTCTTTCAGAAAACTAAGAAAGGAACAAACATATTTTGTGTTCGTCCTAATGAACTATATAGGTTCTCACATAGAATTCCTTCATATAAAATGACTGGTAATGAAAAGGAAGGCGTCCCAAGCGGATCTTTTGAACTGGATCCTGCTGCCTTGCCTTCTAATCTCTTTGAAGTTGGTGATTCTGGTGATGTGAAGATGGAGATTGAAAAGTTGGTGGCTAATGGGAGGATTGACATTTGA 2184 0.3974 MNFDINPHMECNKDEATKAKQIAESRMQSGDFVEALKFAVKAKKLYADVENIAKILTVCEVHSAAQNKLSGSGMDWYGILQAERFSDEATLKKQYRRLALLLHPDKNKFAGAEAAFKLIGEANRVLSDRTNRSLYEMNCGVSMKTAVPKTSSHHSNYQNKSYSNPSFAFLNVFQQAGQETFWTSCKHCNTKFQYYKVYVNASLLCPKCLKSFIALDLGHQGVPPGHTWKSFNNQKETPRYAPPKPPSEVNREKTLGGGHAHKFAPSHPASMGKRAAGVGRHCKGEQSKDGYVARGVAKGKVHKYKAMGPRNSANVGSKRVRQSIPDSRENFDAGNGDDMKDANVQENVVDPSRINARRSSRKKKHVSYAEADVFESTSKKPRPNESFNNNQVEEMKEPASGVGLLNNNNPVSFAAAAGDQNREMGNQVSRPPEGTSLSNKSKIDHVQGEGLSKSEDVDVRMSKVDNCSPLNSNAPSGPDIQCLDADFSDFEKDKAESCFAVNQCWAIYDDADTMPRFYALVKKVTSPFKVQITWLEPDPDDEGEISWFDADLPIGCGKFKLGGSQKTGDRALFSHQMHCIKGSGKGSYLVCPKKGETWAIFRDWDIKWNSDPEKHLKYEFDYVEILSDFTETIGIEVAYLGKVTGFVSLFQKTKKGTNIFCVRPNELYRFSHRIPSYKMTGNEKEGVPSGSFELDPAALPSNLFEVGDSGDVKMEIEKLVANGRIDI* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0300 727 MobiDBLite consensus disorder prediction 226 255 - -
Lan8g0300 727 MobiDBLite consensus disorder prediction 307 388 - -
Lan8g0300 727 MobiDBLite consensus disorder prediction 322 336 - -
Lan8g0300 727 Gene3D DnaJ domain 73 184 IPR036869 -
Lan8g0300 727 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 9 712 - -
Lan8g0300 727 CDD DnaJ 75 128 IPR001623 -
Lan8g0300 727 Pfam DnaJ domain 75 136 IPR001623 -
Lan8g0300 727 SMART dnaj_3 74 131 IPR001623 -
Lan8g0300 727 ProSiteProfiles dnaJ domain profile. 75 139 IPR001623 -
Lan8g0300 727 SUPERFAMILY Chaperone J-domain 71 137 IPR036869 -
Lan8g0300 727 MobiDBLite consensus disorder prediction 365 379 - -
Lan8g0300 727 Pfam Domain of unknown function (DUF3444) 480 683 IPR024593 -
Lan8g0300 727 MobiDBLite consensus disorder prediction 422 445 - -
Lan8g0300 727 MobiDBLite consensus disorder prediction 420 456 - -
Lan8g0300 727 PANTHER - 9 712 - -
Lan8g0300 727 PRINTS DnaJ domain signature 77 95 IPR001623 -
Lan8g0300 727 PRINTS DnaJ domain signature 95 110 IPR001623 -
Lan8g0300 727 PRINTS DnaJ domain signature 111 131 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0300 Lan-Chr8 5098882 5101475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0300 12 224 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.273 5.38e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0300 - - aprc:113873604 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0509 4 7708004 7711592 Lan8g0300 8 5098882 5101475 PCT
Lan2g0307 2 2638410 2644236 Lan8g0300 8 5098882 5101475 PCT
Lan8g0300 8 5098882 5101475 Lan4g0509 4 7708004 7711592 PCT
Lan8g0300 8 5098882 5101475 Lan2g0307 2 2638410 2644236 PCT