Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0298 ATGAGGATGAATATCGGTCCACTGGAAATAGGAGATTATCTAGCAATTGGTGTCATATTTGCTGCGACCGACTCTGTGTGCACATTGCAGGTGCTAAATCAGGATGAAACACCTTTATTGTACAGTCTTGTATTTGGGGAAGGTGTGGTGAATGATGCTACGTCAGTGGTGCTTTTCAATGCAATCCAAAGCTTTGACCTTGAGCAAATTGACCTGTCAATTGCCTTGCAATTTCTTGGCAACTTCTTGTATCTGTTCATGACAAGCACATTGCTTGGGGTTTTGTCAGGTCTGCTCAGTGCTTACATCATTAAAAAATTGTATATCGGAAGGCACTCTACAGATCGAGAGGTTGCTCTTATGATGCTAATGGCATACCTCTCCTACATGCTCGCTGAGTTATGCTATCTGAGTGGCATTTTAACTGTATTCTTTTGTGGGATTGTTATGTCTCATTATACTTGGCATAATGTGACAGAGAGCTCAAGAATCACCACAAAGCATGCTTTTGCAACCTTGTCGTTTGTTGCTGAGATCTTTATCTTCCTTTATGTTGGTATGGATGCCATGGACATTGAAAAGTGGAGGTTTGTCAGTGATAGCCCTGGAACATCGGTAGCAGTGAGTTCAGTATTGTTGGGTCTATTACTTGTTGGAAGAGCAGCTTTTGTTTTTCCGTTATCCTTCTTATCCAACTTATTTAAAAAGTCACAAAGTGAGAAGCTCTCCTTCAGACAGCAGGTTATCATCTGGTGGGCTGGTCTTATGCGAGGTGCTGTTTCAATTGCACTTGCTTATAATCAGTTCACGATGTTGGGGCATACACAACTGCGAACCAATGCAATCATGATTACTAGCACAATTACTGTTGTGCTTGTCAGCACAGTGGTGTTTGGTTTGATGACTAAGCCACTGATAAGGCTTTTGCTGCCTCGTGGCCCTCCCACAAACAGTATGATAAGCACAGATCCTCCTACTCCAAAATCAGTCACTATCCCACTTCTAGGAAGTGCTCAAGAGTCTGAAGCTGATATTGGTGGTCATGAAATTCATCGTCCTGGCAGCCTCCGCGCCTTACTATCCACTCCAACACACACTGTTCACCGATTATGGCGCAAGTTTGATAATGCATTCATGCGTCCCGTTTTCGGTGGCAGAGGTTTTGTTCCTGTTGAGCCCGGCTCACCATCTGAACGCAATGGTCATCAATGGCGTTGA 1218 0.4368 MRMNIGPLEIGDYLAIGVIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLEQIDLSIALQFLGNFLYLFMTSTLLGVLSGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVAEIFIFLYVGMDAMDIEKWRFVSDSPGTSVAVSSVLLGLLLVGRAAFVFPLSFLSNLFKKSQSEKLSFRQQVIIWWAGLMRGAVSIALAYNQFTMLGHTQLRTNAIMITSTITVVLVSTVVFGLMTKPLIRLLLPRGPPTNSMISTDPPTPKSVTIPLLGSAQESEADIGGHEIHRPGSLRALLSTPTHTVHRLWRKFDNAFMRPVFGGRGFVPVEPGSPSERNGHQWR* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0298 405 Pfam Sodium/hydrogen exchanger family 5 306 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lan8g0298 405 Gene3D - 10 61 - -
Lan8g0298 405 PANTHER SODIUM/HYDROGEN EXCHANGER 2 2 404 - -
Lan8g0298 405 PANTHER SODIUM/HYDROGEN EXCHANGER 2 404 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0298 Lan-Chr8 5086400 5090346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0298 2 403 Antiporters AT3G05030 75.123 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0298 - - gmx:100816746 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0298 8 5086400 5090346 Lan20g0679 20 5381144 5386838 LSH
Lan2g0308 2 2670282 2676950 Lan8g0298 8 5086400 5090346 PCT
Lan8g0298 8 5086400 5090346 Lan2g0308 2 2670282 2676950 PCT