Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0281 ATGTTTGATGGAGTACCAGACCAGTTCCATCAATTCATAACACCAATGACTTCACTTCCTCTTCACTTACCCTTCCCTCTTCATTCTTCTGCTGTTGTTGCTGCTGCACCAAACAATACCACCTTCCCTTCTTTTGATCCTTATAACCCTTCTCCTCATCAATTGCCACTTCAACACCAACCCAACCTCTTGCACCAATTACACCAACCTTCTACCCACAAAGAACATGAACCTGAGAAGGAACAACATAATACTTTACCAATGAACTTTGAAATTGAAAGAGATCAAAGTATTGATCCTTGGACTAATGATGAAGTACTTGCACTGTTGAGGATCAGATCTAGCATGGAGAATTGGTTCCCTGAACTCACTTGGGAACATGTCTCAAGGAAGCTAGCAGAGCTTGGATATAAGAGGACTTCAGAGAAGTGCAAGGAGAAGTTTGAAGAAGAAAGCAGATATTTCAACAACATTAGCTACACCAAGAATAATAATAATTATCGGTTTCTTAATGAGATTGAAGAGCTTTATAATCATGGTGATAATCATCAAGTTGCTGAGACTGTAAAGCCAACAAGCATAGAAGAAGGAAAAGACAAGATCATGGACCTAGAAGAAGGTTTAAGCAAACAAAATGAGCAAGGTGATAATGAAGAAGAGATGGTTGGGGAAAATGCAAAGGAGGACAAAAGGCCTAAGAGGAAGAGACCGGATAGGTTTGAAATGTTCAAGGGTTTTTGTGAGAGCATTGTGCACAAGATGATGGAACAACAAGAAGAGATGCATAACAAGTTGATTAAAGATATGATGAAGAGAGATGAAGAGAAGTTTGCAAGGGAAGAAGCATGGAAGAAGCAAGAGATGGATAGGATGAACCAAGATCTTGAGATTATAGCTCAGGAGAAAGCTATTGCTGGTGATAGACAAGCTAATATTATTGAATTCTTGAACAAGTTCTCAGCAACTGCTTCTTCACATAATTCAACCCAAATCAAGGTAACAAATGTTTCAAACCCAAATATTTGCACTACTCCTTCTTCACCATCATCACAAAACCCTAATCCTAATATGGTTCTAGAAAACTCTAGTTCTATTCCTTCCCAAGAAACATTACAAAATGCTTCTTCTACTACTTCACCTACAACTCTCCAGAACCCTAGTTCTTCTTCTCTCAAAAGGCAGAATAATACAATATCAGTTTCAAACAAATACTTCTCAAATGTTATATGTACTTCTGAGAAAGATGGCGTTGGGAGAAGATGGCCAAAAGATGAAGTATTAGCAATGATAAATCTCAGGTGCAGTAGTCTTAATAATAACAATAACAACAATGAAGAGAAGGAAGGAAACAAGCCACCTCTATGGGAGAGAATCTCACAAGGAATGTTGGAGTTGGGATATGAGAGAAGTGCAAAAAGATGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAAAAAAACAAAGGATGTTAATAAGAAAAGGTCCCTTGATTCTAGGACTTGTCCTTATTTCCACCAATTAAACAATCTGTATAATCAAGGAAGGCTTGTTCTACATTCTGAAAAGCCAGAAAATGAGTTAAGTTCACAAGCAAATAATCAAAGCCAATTAGCTGAGCCTTCATTACAAGTGGAGTCTGGTGGTTTCAGTATGCAGCAGCAGCAGCAACAGGTTGATCATCATGGAGGTGAGAAAACTTTGGTGCAAGTAACATCTTTGGATTTTGATCAGTTTTAA 1740 0.3799 MFDGVPDQFHQFITPMTSLPLHLPFPLHSSAVVAAAPNNTTFPSFDPYNPSPHQLPLQHQPNLLHQLHQPSTHKEHEPEKEQHNTLPMNFEIERDQSIDPWTNDEVLALLRIRSSMENWFPELTWEHVSRKLAELGYKRTSEKCKEKFEEESRYFNNISYTKNNNNYRFLNEIEELYNHGDNHQVAETVKPTSIEEGKDKIMDLEEGLSKQNEQGDNEEEMVGENAKEDKRPKRKRPDRFEMFKGFCESIVHKMMEQQEEMHNKLIKDMMKRDEEKFAREEAWKKQEMDRMNQDLEIIAQEKAIAGDRQANIIEFLNKFSATASSHNSTQIKVTNVSNPNICTTPSSPSSQNPNPNMVLENSSSIPSQETLQNASSTTSPTTLQNPSSSSLKRQNNTISVSNKYFSNVICTSEKDGVGRRWPKDEVLAMINLRCSSLNNNNNNNEEKEGNKPPLWERISQGMLELGYERSAKRCKEKWENINKYFKKTKDVNKKRSLDSRTCPYFHQLNNLYNQGRLVLHSEKPENELSSQANNQSQLAEPSLQVESGGFSMQQQQQQVDHHGGEKTLVQVTSLDFDQF* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0281 579 Coils Coil 194 214 - -
Lan8g0281 579 Pfam Myb/SANT-like DNA-binding domain 419 510 IPR044822 -
Lan8g0281 579 Pfam Myb/SANT-like DNA-binding domain 99 175 IPR044822 -
Lan8g0281 579 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 13 572 - -
Lan8g0281 579 MobiDBLite consensus disorder prediction 208 237 - -
Lan8g0281 579 ProSiteProfiles Myb-like domain profile. 93 152 IPR001005 -
Lan8g0281 579 ProSiteProfiles Myb-like domain profile. 420 482 IPR001005 -
Lan8g0281 579 MobiDBLite consensus disorder prediction 336 395 - -
Lan8g0281 579 Gene3D - 421 487 - -
Lan8g0281 579 Gene3D - 101 157 - -
Lan8g0281 579 CDD GT1 419 489 - -
Lan8g0281 579 PANTHER - 13 572 - -
Lan8g0281 579 MobiDBLite consensus disorder prediction 524 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0281 Lan-Chr8 4892552 4895203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0281 100 514 Trihelix Transcription Factor Family AT5G28300 44.885 3.11e-101 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan8g0281 Myb_DNA-bind_4 1.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0281 - - gmx:100804367 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0281 8 4892552 4895203 Lan20g0695 20 5650139 5652527 LSH
Lan8g0281 8 4892552 4895203 Lan4g1322 4 22039410 22042264 LSH
Lan4g0497 4 7503300 7506015 Lan8g0281 8 4892552 4895203 PCT
Lan8g0281 8 4892552 4895203 Lan4g0497 4 7503300 7506015 PCT