Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0267 ATGTACTTCTATTTTGGCTATTTCAAGGTTGCAAATTTATCAAAAATACTTCCCAAAGATATGGAAGCCCCTCCTGGTGGAGTGGATGATATGACTAAGCTATCCTATTTGCACGAACCTGGAGTCCTTCAGAACTTAAAAATTAGATATGAATTGAATGAAATATATACTTATACTGGAAATATTCTGATTGCAATAAATCCATTCCAAAGACTACCTCATATTTATGGTGCTCACATGATGCAACAATACAAGGGAGCACCATTCGGAGAATTAAGCCCTCATGTATTTGCAGTTGCTGATGTTGCATATAGGGCTATGGTTAATGAAGGGAAAAATAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTCATGCAATACCTTGCTTTCTTAGGTGGTAGGGCTGCAACTGAAGGACGAACAGTTGAACAACAAGTTCTTGAATCAAACCCAGTTTTGGAAGCATTTGGAAATGCTAAAACTGTCAGGAATAACAATTCTAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGAAGAATCTCAGGAGCAGCAATCCGAACTTACCTTCTAGAGAGATCTCGGGTTTGCCAAGTTAATGATCCTGAGCGAAACTACCACTGCTTTTATCTTCTTTGTAATGCACCGCAGGAGGAAGTTGAGAAATACAAATTAGGAAATCCTAGATCATTTCACTACCTTAACCAGTCAAAATGCTATGAACTGGCTGATGTAAGTGATGCTCGTGAGTATCTTGCCACCCGGAGAGCAATGGATATTGTTGGAATAAGCCAAAAGGATCAGGAAGCCATTTTCAGAGTTGTTGCTGCAATTCTTCATATTGGTAATATTGAATTTTGCAAAGGAAAGGAAGTTGACTCATCAATTCCAAAAGATGACAATGCCAAATTCCACCTAAAAACAACTGCTGAGCTTCTCATGTGTAATGCTGATGCCTTGGAAGACGCATTATGTAAGCGTGTCATGATCACCCCAGAAGAAGTTATAAAACGGAGCCTTGATCCCCAAAGTGCAGCAGTGAGTAGAGATGGATTGGCAAAAACAATTTATTCTCGGCTATTTGACTGGTTGGTGGACAAGATTAACAGTTCAATTGGACAAGACCCCAATTCTAAATGTTTGATTGGGGTCCTTGATATCTATGGTTTTGAAAGCTTTAAATTCAACAGTTTTGAGCAGTTTTCCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGCACGTGTTTAAAATGGAACAAGAAGAATATACCAAGGAGCAGATCGATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGAAACCTGGAGGAATCATTGCACTCCTTGACGAAGCTTGCATGTTTCCAAAGTCAACACATGAAACATTTGCGAACAAGCTTTATCAAACATTTAAAAGCCACAAGCGCTTCATTAAGCCAAAATTGTCTCGAACAGATTTCACCGTTGCTCATTATGCTGGGGAGGTGACATACCAGTCTGACCAATTTTTAGACAAAAATAAGGATTATGTGGTTCCTGAACATCAAGATTTATTGGGTGCTTCCAAATGTTCTTTTGTAGCTGGCCTTTTTCCACCACTTCCAGAAGAGTCATCAAAATCTTCCAAATTTTCTTCAATTGGATCTCGTTTTAAGTTACAACTACAACAGCTAATGGAAACATTAAATTCTACAGAACCCCATTACATTAGATGCGTGAAACCAAACAACCTCCTCAAGCCTGCAATTTTTGAGAATATGAACATTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAGGCAATCAGAATTAGTTGTGCTGGCTACCCCACTCGTCGTCCTTTCTTTGAATTTGTAAACAGATTTGGCCTCCTTGCCTCTGAGGCCATGGAAGCAAATTATGATGAAAAGACTGTCTGCAAGAAGATTCTGGATAAGATGGGGCTTAAAGGATATCAGATTGGAAAAACAAAGGTATTCTTGAGAGCAGGTCAGATGGCTGAACTAGATGCACGGAGAGCTCAAATACTTAGTAATGCAGCAAAATCTATTCAACGGCGTATACGAACCCATCAAGCTCGTAGACATTATCTTGCATTGCGAAAGAAGACCATATACGTGCAGTCTCGTTGGAGAGGAAGACTTGCTTGTAAACTCTATGATGGCTTAAGAAAGGAGGCTGCTGCTAAGAAAATTCAAAAGAATGTACGCAGATATGAAGCTAGGAAAGCATATAAAGAACTTCATGTGGCAGCACTTACATTGCAAACAGCTTTAAGAGCAATTGCTGCTCGGAAGGAGTTCAGATTTAGGAAGCAGACTAAAGCTTCCATCATTATTCAGGCTCGGTGGCGAAGCCACAAAGCTTCTTTATATTATAAGAGGCTCAAGAGGGGTACAATAGTTACACAATGCAGATGGAGGGGGCGCATGGCCAGGAAAGACCTTAGGAAACTGAAAATGGCTGCAAGAGAAACTGGCGCACTTCAAGAAGCAAAGGATAAGCTTGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAACTAGAAAAAGGTTTAAGGACCAATGTGGAAGAATCCAAAGCCCAAGAGATAGCAAAACTGCAGAACTCATTGCAGGAGATGCAGAGCAAACTTGATGAAACCAATGCTTTGCTCGTCAAGGAGCGAGAGAATGCAAAGAAAGTTATCGTAGAAGCACCTCCTGTTATTCAAGAAACTCAGGTTGTTGTTGAAGATACGCAGAAGATTGAGGCACTAACAGCAGAAATTCAGAGCCTAAAGATTTCATTTGAGTCAGAGAAGCAGAAAGCTGATGACTTTGAAAGAAAATATAATGAAGCTCAAGTTTGTAGCGAAGAAAGGGGTAAAAAAATAGAAGACTTGGAGAAGAAGGTTCGTCAGCTCCAAGAATCATTGACTAGGCTAGAAGAGAAGAATAATAATATAGAATCGGAGAACCAGGTTCTACGTCAACAAGCTGTATCCATGGCAGCTGCACCTGCTAAGGTCCTTTCAGGAAGGTCCAGATCAATTATCCAGAGAGGTGCTGAAAGTGGTCATATTCCAGTGGAAGCGAAGACACCTTCGACTAATCACGAACTGCATCAAAGCCCATCAATGAGCCAGAGGGAATCCTCTGAAGTGGATGATAAACCCCAAAGGTCACTAAATGAGAAGCAACAGGAGAATCAAGAGTTACTCATTAGATGTATTGCGCAACATCTAGGCTTTGCCGGGAACAGACCAATTGCTGCCTGTATCATATACAAATGCCTCTTGCATTGGAGATCATTTGAAGTTGAGCGTACCAGCGTTTTTGATCGTATCATCCAAACTATCGGTCATGCAATTGAGACTCAGGATAACAATGACGTCTTGGCTTATTGGTTATCCAATGCCTCAACACTTCTCTTGTTACTCCAGCGCACACTCAAGGCAAGTGGAGCTGCTGGGATGGCTCCACAACGCCACCGTCGTTCTTCATCAGCAACTCTATTTGGGAGGATGACTCAAAGTTTCCGTGGAACTCCAACAGGAGTCAATCTTTCCCTAATCAATGGTAGCTCGAGCAGAGGGGTAGAAACATTAAGACAAGTTGAAGCCAAATACCCAGCTCTGCTTTTCAAACAGCAGCTTACAGCATATGTGGAAAAGATATATGGAATGATTCGTGATAACTTGAAGAAAGAAATTTCTCCTCTGCTTGGTTTATGCATCCAGGCACCGAGAACATCCAGAGCAAGCATGGTTAAGGGATCATCACGTTCTGTCGCAAACACTGAAGCCCAGCGCACTTTGATTGCACACTGGCAGGGGATAGTTAAGAGCCTGGGGAACTTCTTAAACACTTTGAAAGCAAATCATGTCCCCCCATTTTTGGTTCGTAAGGTTTTCACACAAATTTTTTCTTTCATCAATGTACAATTATTCAATAGTCTTCTATTAAGAAGGGAGTGCTGCTCATTTAGTAATGGAGAATATGTCAAGGCTGGTTTGGCTGAATTGGAGCATTGGTGTTATAAGGCAACAGATGAGTATGCTGGTTCAGCTTGGGATGAGCTCAAACATATTAGACAGGCTATTGGATTTCTGGTCATACATCAGAAACCGAAGAAAACTCTGGATGAAATAAGTCATGATCTATGCCCAGTCCTTAGTATACAGCAGCTGTATCGGATTAGCACCATGTACTGGGATGACAAGTATGGCACGCATAGTGTCTCCCCTGATGTCATATCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCGTTTTCTGTTGATGACATATCAAAGTCGATGGAACAGATGGATATCGCTGACATAGATCCCCCGCCACTAATTCGTGAAAACTCAGGCTTTAGCTTTTTGTTGCCACGCCCAGATTGA 4506 0.4092 MYFYFGYFKVANLSKILPKDMEAPPGGVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHIYGAHMMQQYKGAPFGELSPHVFAVADVAYRAMVNEGKNNSILVSGESGAGKTETTKMLMQYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCNAPQEEVEKYKLGNPRSFHYLNQSKCYELADVSDAREYLATRRAMDIVGISQKDQEAIFRVVAAILHIGNIEFCKGKEVDSSIPKDDNAKFHLKTTAELLMCNADALEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVDKINSSIGQDPNSKCLIGVLDIYGFESFKFNSFEQFSINFTNEKLQQHFNQHVFKMEQEEYTKEQIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKSHKRFIKPKLSRTDFTVAHYAGEVTYQSDQFLDKNKDYVVPEHQDLLGASKCSFVAGLFPPLPEESSKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENMNIMQQLRCGGVLEAIRISCAGYPTRRPFFEFVNRFGLLASEAMEANYDEKTVCKKILDKMGLKGYQIGKTKVFLRAGQMAELDARRAQILSNAAKSIQRRIRTHQARRHYLALRKKTIYVQSRWRGRLACKLYDGLRKEAAAKKIQKNVRRYEARKAYKELHVAALTLQTALRAIAARKEFRFRKQTKASIIIQARWRSHKASLYYKRLKRGTIVTQCRWRGRMARKDLRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKGLRTNVEESKAQEIAKLQNSLQEMQSKLDETNALLVKERENAKKVIVEAPPVIQETQVVVEDTQKIEALTAEIQSLKISFESEKQKADDFERKYNEAQVCSEERGKKIEDLEKKVRQLQESLTRLEEKNNNIESENQVLRQQAVSMAAAPAKVLSGRSRSIIQRGAESGHIPVEAKTPSTNHELHQSPSMSQRESSEVDDKPQRSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRHRRSSSATLFGRMTQSFRGTPTGVNLSLINGSSSRGVETLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASMVKGSSRSVANTEAQRTLIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQMDIADIDPPPLIRENSGFSFLLPRPD* 1502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0267 1501 Gene3D Myosin VI head, motor domain, U50 subdomain 276 565 - -
Lan8g0267 1501 SMART MYSc_2a 21 697 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0267 1501 ProSiteProfiles IQ motif profile. 747 776 IPR000048 GO:0005515
Lan8g0267 1501 Pfam DIL domain 1320 1423 IPR002710 -
Lan8g0267 1501 Gene3D - 698 748 - -
Lan8g0267 1501 Gene3D - 749 796 - -
Lan8g0267 1501 Gene3D - 797 846 - -
Lan8g0267 1501 MobiDBLite consensus disorder prediction 1067 1081 - -
Lan8g0267 1501 MobiDBLite consensus disorder prediction 1037 1082 - -
Lan8g0267 1501 MobiDBLite consensus disorder prediction 1052 1066 - -
Lan8g0267 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 749 IPR027417 -
Lan8g0267 1501 ProSiteProfiles IQ motif profile. 770 799 IPR000048 GO:0005515
Lan8g0267 1501 Gene3D Kinesin motor domain 29 626 IPR036961 -
Lan8g0267 1501 PANTHER MYOSIN-9 10 1498 - -
Lan8g0267 1501 Coils Coil 880 914 - -
Lan8g0267 1501 Coils Coil 841 868 - -
Lan8g0267 1501 CDD MyosinXI_CBD 1081 1467 IPR037975 GO:0007015
Lan8g0267 1501 ProSiteProfiles IQ motif profile. 722 751 IPR000048 GO:0005515
Lan8g0267 1501 Gene3D - 403 587 - -
Lan8g0267 1501 CDD MYSc_Myo11 40 684 IPR036018 -
Lan8g0267 1501 ProSiteProfiles Myosin motor domain profile. 26 696 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0267 1501 ProSiteProfiles IQ motif profile. 699 726 IPR000048 GO:0005515
Lan8g0267 1501 PANTHER MYOSIN 10 1498 - -
Lan8g0267 1501 Pfam Myosin head (motor domain) 28 684 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0267 1501 Gene3D - 216 274 - -
Lan8g0267 1501 Gene3D - 631 694 - -
Lan8g0267 1501 Pfam IQ calmodulin-binding motif 820 839 IPR000048 GO:0005515
Lan8g0267 1501 Pfam IQ calmodulin-binding motif 701 719 IPR000048 GO:0005515
Lan8g0267 1501 Pfam IQ calmodulin-binding motif 796 816 IPR000048 GO:0005515
Lan8g0267 1501 Pfam IQ calmodulin-binding motif 749 768 IPR000048 GO:0005515
Lan8g0267 1501 PRINTS Myosin heavy chain signature 56 75 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0267 1501 PRINTS Myosin heavy chain signature 113 138 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0267 1501 PRINTS Myosin heavy chain signature 160 187 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0267 1501 PRINTS Myosin heavy chain signature 393 421 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0267 1501 PRINTS Myosin heavy chain signature 446 474 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0267 1501 Coils Coil 974 1015 - -
Lan8g0267 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 748 847 IPR027417 -
Lan8g0267 1501 SMART iq_5 817 839 IPR000048 GO:0005515
Lan8g0267 1501 SMART iq_5 769 791 IPR000048 GO:0005515
Lan8g0267 1501 SMART iq_5 794 816 IPR000048 GO:0005515
Lan8g0267 1501 SMART iq_5 746 768 IPR000048 GO:0005515
Lan8g0267 1501 SMART iq_5 698 720 IPR000048 GO:0005515
Lan8g0267 1501 SMART iq_5 721 743 IPR000048 GO:0005515
Lan8g0267 1501 ProSiteProfiles IQ motif profile. 818 847 IPR000048 GO:0005515
Lan8g0267 1501 Coils Coil 939 966 - -
Lan8g0267 1501 SMART DIL_2 1319 1426 IPR002710 -
Lan8g0267 1501 ProSiteProfiles Dilute domain profile. 1130 1444 IPR002710 -
Lan8g0267 1501 ProSiteProfiles IQ motif profile. 795 822 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0267 Lan-Chr8 4687625 4700792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0267 10 1501 Myosins gene family AT1G54560 83.311 0.0 2608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0267 K10357 - gmx:100816792 2685.98