Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0256 ATGTGGGCAGGAGTGAACAAGAGCCAATACGAGTTGTGTGAAGAAATTGGTCGTGGTCGTTTCGGAACCATTTTTCGTTCCTTCGACCCAACCACGAACCAATTCTACGCTTCCAAAATCATCCACAAATCCCTCTTAACCGATTCCACCGACCGCGAGTGTCTCCAAAACGAACCCAAATACTTGACCCTCCTTTCTCCTCACCCCAACATCCTTCAAATCTACGAAGTACACGAAGACGACGACGTTTTATCTATAGTAATGGAACTATGCCAACCCTTAACGCTATTCGACAAGATTGTGAAAACAAACACTTTAACCGAACCAGAAGCTGCATCAATCATGGTGCAGCTTCTATCAGCGATGAGCCACTGCCACCGTCTCGGCGTGGCTCATCGCGATATAAAACCTGAAAACATTCTCTTCGATTCGAGGGAGAATGTTAAGGTTGCGGACTTTGGGTCCGCGGAGTGGTTCGGTGAAGGGAGGAAGATGAGTGGGATAGTTGGGACGCCGTATTATGTGGCGCCGGAGGTGTTGTTGGGAAGGGAGTATGATGAGAAGGTTGATGTTTGGAGCTGTGGTGTGATTTTGTATATAATGTTGGTTGGGGTTCCTCCGTTTTATGGTGATGATGCTGCTCAGATTTTTGAGGCTGTTATTAGGGGTAATCTTAGGTTTCCTTCAAGGCTATTTAGGACTGTGTCTTCTTCTGCTAAGGATCTTTTGAGGAAGATGATTTGTAGGGATGCTTCTACAAGATTCTCTGCTGAACAAGCCTTAAGGCATCCTTGGATCTTGAGTGGAGGAGAGAGGGCTGATCTGAATTGA 831 0.4633 MWAGVNKSQYELCEEIGRGRFGTIFRSFDPTTNQFYASKIIHKSLLTDSTDRECLQNEPKYLTLLSPHPNILQIYEVHEDDDVLSIVMELCQPLTLFDKIVKTNTLTEPEAASIMVQLLSAMSHCHRLGVAHRDIKPENILFDSRENVKVADFGSAEWFGEGRKMSGIVGTPYYVAPEVLLGREYDEKVDVWSCGVILYIMLVGVPPFYGDDAAQIFEAVIRGNLRFPSRLFRTVSSSAKDLLRKMICRDASTRFSAEQALRHPWILSGGERADLN* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0256 276 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 273 - -
Lan8g0256 276 SUPERFAMILY Protein kinase-like (PK-like) 7 268 IPR011009 -
Lan8g0256 276 SMART serkin_6 10 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0256 276 ProSiteProfiles Protein kinase domain profile. 10 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0256 276 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 1 7 273 - -
Lan8g0256 276 PIRSF ILK 2 261 - -
Lan8g0256 276 CDD STKc_CAMK 9 265 - -
Lan8g0256 276 Gene3D Transferase(Phosphotransferase) domain 1 5 274 - -
Lan8g0256 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Lan8g0256 276 Pfam Protein kinase domain 10 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0256 Lan-Chr8 4604327 4605959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0256 10 274 EF-hand Containing Proteins AT1G50700 41.418 9.01e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan8g0256 Pkinase 3.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0256 - K08794 gmx:548089 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0256 8 4604327 4605959 Lan20g0732 20 6039610 6041295 LSH