Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0250 ATGGAAGCCCATGACAGCACCAACCACACCAATAACAATAACAACCTAAGCTCCTATTTCCACCACTTCAACCACCAGCCGCCGCCACCGCCGCCTCCGACGAATGGGGTGGTGCCGCCAACTAGCGATGGGTCCCACTCTCATATGCTGTACCCTCACACCACCACAACAACAACTACTGTGGTTCCTTCTGTGGTGTCGTCTCAGTCACAATTGCAGAAGAAGAAACGAGGGAGACCGAGAAAATACTCTTCTCCTGAACAAGCTATCGCTGCTAGGAAAGCCGCTACGACATCGTCTTCTCCTTCTCCATCTCTTTCTTCTAACAAAAAATCAACTCAATCCTTCTCTCTAGGTACTGCAGGACAAGATTTCACTCCACATTTCATTAATGTTCTTGCTGGTGAGGATGTTGGCCAAAAAATTATGTTTTTCATGCAACAAAACAAGTGTGAGATCTGCATTCTTTCTGCATCTGGTTTCATCTCTAATGCCTCTCTTAGTCAGCCAGCAACCTCAGGAGGCAGTATTACATATGAGGGACGGTTTGAGATTGTTTCACTTAATGGTTCCTATATCCGTAATGAAGTTGGAAGTCGATCTGGTGGTCTCAGTGTATGCTTATCTAATACTGATGGGCAAATCATAGGTGGTGGCGTTGGTGGACCCCTTAAAGCTGCTGGTCCAGTTCAGGTCATTGTTGGTGCCTTCGTTATTGACCCCAAGAAGGATGCTAGTGCTGGAAATAAAGGTGATGTTTCTTCCACCAAGTTGCCACCACCACCGGTCAGTGATCCGGTATCAAGTTTTGGATTCGGCCGAGCAGTTGACTCTTCTACAGGGAATCCAATCAGGGGAAATGAGGAGCATCAAACTATTGGAGGAAGTCATTTCAATATTCAACAAGGTGGTATGCAAGGGACGCATTCCCGTCCCTCTGACTGGGGAGGTCATCCGGATTCAAGAAATGCGGACTTTGAACTGACAGGAAGAACTGGTCATGGAGCACATCAATCACCTGATGAAAATGGATACTATGAGTAG 1044 0.4674 MEAHDSTNHTNNNNNLSSYFHHFNHQPPPPPPPTNGVVPPTSDGSHSHMLYPHTTTTTTTVVPSVVSSQSQLQKKKRGRPRKYSSPEQAIAARKAATTSSSPSPSLSSNKKSTQSFSLGTAGQDFTPHFINVLAGEDVGQKIMFFMQQNKCEICILSASGFISNASLSQPATSGGSITYEGRFEIVSLNGSYIRNEVGSRSGGLSVCLSNTDGQIIGGGVGGPLKAAGPVQVIVGAFVIDPKKDASAGNKGDVSSTKLPPPPVSDPVSSFGFGRAVDSSTGNPIRGNEEHQTIGGSHFNIQQGGMQGTHSRPSDWGGHPDSRNADFELTGRTGHGAHQSPDENGYYE* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0250 347 Gene3D - 127 251 - -
Lan8g0250 347 MobiDBLite consensus disorder prediction 24 38 - -
Lan8g0250 347 MobiDBLite consensus disorder prediction 39 73 - -
Lan8g0250 347 CDD DUF296 126 237 IPR005175 -
Lan8g0250 347 MobiDBLite consensus disorder prediction 244 347 - -
Lan8g0250 347 ProSiteProfiles PPC domain profile profile. 119 262 IPR005175 -
Lan8g0250 347 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 341 IPR039605 GO:0003680
Lan8g0250 347 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 341 - -
Lan8g0250 347 SUPERFAMILY AF0104/ALDC/Ptd012-like 123 238 - -
Lan8g0250 347 MobiDBLite consensus disorder prediction 91 118 - -
Lan8g0250 347 MobiDBLite consensus disorder prediction 1 22 - -
Lan8g0250 347 MobiDBLite consensus disorder prediction 1 118 - -
Lan8g0250 347 MobiDBLite consensus disorder prediction 273 309 - -
Lan8g0250 347 Pfam Plants and Prokaryotes Conserved (PCC) domain 127 237 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0250 Lan-Chr8 4532836 4536454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0250 43 347 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 47.337 2.31e-79 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0250 - - lang:109345383 486.108