Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0223 ATGGGAATGATGGATCTACATATCAAGATCAAGTTTATATTAGGAATTGGAGGCAGAAAGAGAAATCATAGCACTGCAAAGAAGCCTTCATGGTTGATGCCAATAACACATGGTTTTCATGTGGTGGAGCATCATGTAATCAATGATGACTTTAATGACTCAGATTTTGATTCAGTTGTGATTCAGAGGGAGCAAATAGATGAAACAGAACTGTGGTATTTTGGCATCTTTGATGCTCTAATTGGAGATGGGATTATTAAGTATATGCAGTCTCATTTCTTTGACAAGAAGCTCACAGAATCTCATATGAGGAGAAAAACCAAAGAAGCACTGAAGAGGGCTTACTTGACTGCAAAGGCAAAGATAAGAGAGGCAAATAAATCAGAGGAGACATGCAGAATAGGTTCAACATCTGTGATGGTGATAAATGGAGAAAAACTTGTGATAGCCAACTTGGGTGATTATGGAACTGTTTTGTGTAAACATGGCATAGCTCAACAGATAACTGGTATGCACAAAAAATCAGCCAAGATAAATTGGTTTCAGGGACTCTTTTCAGGTACAAAGAATTCTACAGGCTCAGAACTTGTTGTGGGAGTTGACAGGATTGACTCTGATACTGACTTTTTAATCTTAGCAAGCAATGGCATTTGGGAGGTGATGAAGAATCAAGAAGCAGTGAATCTTATTAGGCACATAGAGGATCCACAAGAAGCAGCAGAGTGCTTGGCAAATGAAGCTTTGAGTAGGATGAGCAAATCCAACATCTCATGCTTAATTATTCGCTTTGACTGA 795 0.3862 MGMMDLHIKIKFILGIGGRKRNHSTAKKPSWLMPITHGFHVVEHHVINDDFNDSDFDSVVIQREQIDETELWYFGIFDALIGDGIIKYMQSHFFDKKLTESHMRRKTKEALKRAYLTAKAKIREANKSEETCRIGSTSVMVINGEKLVIANLGDYGTVLCKHGIAQQITGMHKKSAKINWFQGLFSGTKNSTGSELVVGVDRIDSDTDFLILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLANEALSRMSKSNISCLIIRFD* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0223 264 Gene3D - 40 179 IPR036457 -
Lan8g0223 264 ProSiteProfiles PPM-type phosphatase domain profile. 53 263 IPR001932 -
Lan8g0223 264 Pfam Protein phosphatase 2C 202 256 IPR001932 -
Lan8g0223 264 Pfam Protein phosphatase 2C 71 175 IPR001932 -
Lan8g0223 264 Coils Coil 108 128 - -
Lan8g0223 264 PANTHER ALPHABET, ISOFORM E-RELATED 11 263 - -
Lan8g0223 264 Gene3D - 183 264 IPR036457 -
Lan8g0223 264 SUPERFAMILY PP2C-like 59 264 IPR036457 -
Lan8g0223 264 SMART PP2C_4 34 261 IPR001932 -
Lan8g0223 264 CDD PP2Cc 73 263 IPR001932 -
Lan8g0223 264 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 11 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0223 Lan-Chr8 4038889 4041603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0223 1 263 PP2C-type Phosphatase Gene Family AT3G23360 45.683 4.19e-75 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0223 K19704 - gmx:100794054 382.874