Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0197 ATGGCTTCAATGAATGACCAAAGTGCAATTGAGCTCCTTAATGGTGAAGCTATCCTACACAGCCAGTTATTCAGCTTCATAAGACCAATGTGTCTTAAATGGGCTGTGGAACTTGGCATAGCAGATATAATCCACAACCATGCCAAACCTATCACTTTTCCTGAGTTGATGTTAGTCCTAGTGCAAGTTCCACCAACTAAAGCTTCTTTAGTGAAACGTTTCATGCGTTTTCTTGCATATAATGGAATCTTTGCAATCCATGAAAGCCAAGAAGAACAACATGAAACATATAGTTTGACCCCAGCATCAAAGCTTCTTGTCAAAGGCAGTGATCATTGTTTAACTCCATTTGTTGTTTGGGCTACAGATCCTGTTAGGATGAATAACTATCATCACTTAGGGAATTGGGTTTCTGGTGAAGTTCCTACTTTATATGAAACTTCCTTAGGAATAACTCTTTGGGAATATCTTGAAAAAAACCCTGAATATATGAGTACCTTTAATGAGGGTATGGCTAGTGATTGTAAACTACTGCAGTTGACTTTGAAAGATTGTAGTTGTGTTTTTGAAGGATTAGATACCATTGTTGATGTAGGTGGTGGAAATGGAACCATAGCAAAAATCATTTCTGAATTATTCCCCAAGTTAAAATTTATTGTATTTGACCTTCCACAGGTTGTAGCAAACTTGCAAGGAAGCAATAATGTGAGTTATGTTGCTGGTGACATGTTTGTTTCTATCCCTCAAGCTGATGCAGTCCTTCTAAAGAGGATTTTACACGATTGGACTGATGAGATTTGCATAAAGATCCTAAAAAAGTGTAAAGATTCTATTTCAAGCAGAAAAGGAAAAGTGATTATTATAGAGACAATTATAAATGAAAAGCAAGAAGATAAAGTTATGACTGAAACAAAGCTTAGCGTGGATATAATGATGATGACTATTAATGGAAAAGAGAGAAATGAAAAAGAATGGAAGGAACTCTTTGTTGCAGCAGGATTCAAACACTACAAAATATTTCATATACATGGTTTGAGATCTCTTATTGAGGTCTATCCCTAA 1062 0.3578 MASMNDQSAIELLNGEAILHSQLFSFIRPMCLKWAVELGIADIIHNHAKPITFPELMLVLVQVPPTKASLVKRFMRFLAYNGIFAIHESQEEQHETYSLTPASKLLVKGSDHCLTPFVVWATDPVRMNNYHHLGNWVSGEVPTLYETSLGITLWEYLEKNPEYMSTFNEGMASDCKLLQLTLKDCSCVFEGLDTIVDVGGGNGTIAKIISELFPKLKFIVFDLPQVVANLQGSNNVSYVAGDMFVSIPQADAVLLKRILHDWTDEICIKILKKCKDSISSRKGKVIIIETIINEKQEDKVMTETKLSVDIMMMTINGKERNEKEWKELFVAAGFKHYKIFHIHGLRSLIEVYP* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0197 353 Gene3D Vaccinia Virus protein VP39 107 353 IPR029063 -
Lan8g0197 353 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 353 IPR016461 GO:0008168
Lan8g0197 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 352 IPR029063 -
Lan8g0197 353 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 352 - -
Lan8g0197 353 SUPERFAMILY "Winged helix" DNA-binding domain 11 110 IPR036390 -
Lan8g0197 353 PIRSF O-mtase 1 353 IPR016461 GO:0008168
Lan8g0197 353 Pfam Dimerisation domain 30 79 IPR012967 GO:0046983
Lan8g0197 353 Gene3D - 1 106 IPR036388 -
Lan8g0197 353 PANTHER O-METHYLTRANSFERASE 2 352 IPR016461 GO:0008168
Lan8g0197 353 Pfam O-methyltransferase domain 130 335 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0197 Lan-Chr8 3350358 3352256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0197 8 339 Monolignol Biosynthesis Gene Families AT5G54160 33.431 2.04e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0197 K22588 - gmx:100819796 484.952