Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0193 ATGGAGTGCAATAAGGATGAGGCCATCAAAGCTAAAGAAATTGCAGAGAAAAAGTTTGCTGCAAAGGATATTTTTGGTGCAAAGAAGTTTGCTTTAAAGGCTCAAAATTTATATCCCAATCTTGAGGGTATTTCTCAATTGATAACAACATTTGATGTATATATTTCTGCAAAGAATAGAATAAATGGGGAACCAGATTGGTATGGTATACTTGGAGTGGATCGCTTCATTGATGAAAACACACTGAGAAAACAATATAGAAAGCTAGCCCTTGAGCTTCACCCAGATAAGAACAAGTCCATTGGTGCACATGGTGCATTTATCCTTATTTCGGAGGCATGGAAAATACTATCAGATAAGGGTAAAAGGGTAGCATATGATGAGAAGATAAATGCAAGAGGGCATGAAATTTCAAGTAATAATGGTGCAAGTTTATCAGCAGAAAATAACGCTTCTTCATGTGCAAGCACTGTTCAGAAAAAAGCTCCAAAAGAACATGATGCATTCTCAAGTTTTTGTTCTGCGGATCCATATGAAATTGAAAAATTGATTCAGGAGGTGTTAGAGGAAGAGAAACGGAAACGTGAGGAGAGAAAAGCTGCAAGGATGAAGCATTTACGCATGTTTTGTGTGTGTAGTTGCACACGATGA 651 0.3733 MECNKDEAIKAKEIAEKKFAAKDIFGAKKFALKAQNLYPNLEGISQLITTFDVYISAKNRINGEPDWYGILGVDRFIDENTLRKQYRKLALELHPDKNKSIGAHGAFILISEAWKILSDKGKRVAYDEKINARGHEISSNNGASLSAENNASSCASTVQKKAPKEHDAFSSFCSADPYEIEKLIQEVLEEEKRKREERKAARMKHLRMFCVCSCTR* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0193 216 Coils Coil 180 204 - -
Lan8g0193 216 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lan8g0193 216 SUPERFAMILY Chaperone J-domain 57 130 IPR036869 -
Lan8g0193 216 SMART dnaj_3 65 122 IPR001623 -
Lan8g0193 216 CDD DnaJ 66 119 IPR001623 -
Lan8g0193 216 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lan8g0193 216 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lan8g0193 216 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lan8g0193 216 PANTHER HEAT SHOCK PROTEIN-LIKE 1 181 - -
Lan8g0193 216 Gene3D DnaJ domain 63 201 IPR036869 -
Lan8g0193 216 PANTHER BNAC03G44070D PROTEIN 1 181 - -
Lan8g0193 216 Pfam DnaJ domain 66 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0193 Lan-Chr8 3253935 3254585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0193 4 131 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.299 2.43e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0193 - - lang:109329175 360.147