Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0185 ATGGAGGGAAAGGAGAATTTTGTTGGTGCTGGTATTGCTCATTCAGTGGTAGGTGGTGAAGCTACTAATAGTTTCCAAGTGGCTCCTAGAATTGAGAGCAACTTGGATTTTTCCATGGCCACGGTGCCAGCACCGTCGCCGGCTACAGAGGGGAAGAAGAAGAGGGGGAGGCCTAGGAAGTATGGACCAGATGGTAAGGTGGCAGCCATGGCTTTGTCTCCAATGCCGATTTCGTCATCAATTCCGTTGACCGGAGACTTCTCAGCTTGGAAAAGGGGGAGAGGGAGGCCTGTTGAATCTATCAAGAAGTCAACATATAAGTATGAAGTTGAAAGTCCAGGACAAGGTGGGGGAATTGCATACACAGTTGGTGCCAATTTCACAGCTCATGTGCTTACAGTAAATGCTGGCGAGGATGTTACTATGAAGGTTATGTCCTTTTCTCAACAAGGATCACATGCTATATGCATTCTGTCTGCAAATGGCACGATTTCAAATGTTACACTTCGTCAACCGACTTCTTCAGGGGGTACTCTAACATATGAGGGACGGTTTGAGATTCTATCCTTGTCTGGTTCTTTCATGCCAACTGATAATGGAATTGCGAGAAGCAGATCCGGTGGGATGAGTGTCTCTTTGGCAGGTCCAGATGGTCGAGTTATGGGGGGTGGACTTGCTGGTTTGCTGATAGCTGCAGGTCCTGTGCAGGTTGTTGTGGGCAGTTTTCTTCCTGGTCACCATTTGGAGCATAAAAACAATCAGAGGAGGGTGGAGCATATATCAACTATTACCCCTACACATGTTAATCCTATCTCTAATGATGACGGAATAAAAGTTAGTTTTGGTGGATTTAAGCCTATTATGACGCCTGCTGCATTTCAAGAAGAGCATATTGCTTCTTATAACAATGTTCAAGACTCTAGGAACTCATCTGCTGATGATAAATAA 948 0.4536 MEGKENFVGAGIAHSVVGGEATNSFQVAPRIESNLDFSMATVPAPSPATEGKKKRGRPRKYGPDGKVAAMALSPMPISSSIPLTGDFSAWKRGRGRPVESIKKSTYKYEVESPGQGGGIAYTVGANFTAHVLTVNAGEDVTMKVMSFSQQGSHAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSFMPTDNGIARSRSGGMSVSLAGPDGRVMGGGLAGLLIAAGPVQVVVGSFLPGHHLEHKNNQRRVEHISTITPTHVNPISNDDGIKVSFGGFKPIMTPAAFQEEHIASYNNVQDSRNSSADDK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0185 315 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 14 314 - -
Lan8g0185 315 SMART AT_hook_2 52 64 IPR017956 GO:0003677
Lan8g0185 315 SMART AT_hook_2 91 103 IPR017956 GO:0003677
Lan8g0185 315 CDD DUF296 130 242 IPR005175 -
Lan8g0185 315 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 242 IPR005175 -
Lan8g0185 315 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 14 314 IPR039605 GO:0003680
Lan8g0185 315 Gene3D - 128 262 - -
Lan8g0185 315 SUPERFAMILY AF0104/ALDC/Ptd012-like 126 249 - -
Lan8g0185 315 MobiDBLite consensus disorder prediction 40 64 - -
Lan8g0185 315 ProSiteProfiles PPC domain profile profile. 124 266 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0185 Lan-Chr8 3138582 3143672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0185 37 255 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 63.158 9.28e-87 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0185 - - gmx:100789179 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0185 8 3138582 3143672 Lan20g0802 20 6978746 6983585 LSH
Lan8g0185 8 3138582 3143672 Lan4g1262 4 21204051 21208704 LSH
Lan8g1142 8 15407871 15414252 Lan8g0185 8 3138582 3143672 PCT
Lan8g0185 8 3138582 3143672 Lan8g1142 8 15407871 15414252 PCT