Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0163 ATGGATCCTACGGGGTGCTGGTTTAACAAGTTCAAGTTAAAGGACAAAATGCAATCCTCAAAACACAAGGAATCTGCAGGCATTGCAAAAGTAGGGTCAAACCCCCCAACAGATGAAGAAGCTCCTTCAAATGTCACCAAACAGAAGGTTGAAGCTGCAAAGCAGTTCATAGAAAACCATTACAAGAAGCAGATGAAGGACCTTCAGGAGAGGAAGGAACGACGTAATATGCTAGAGAAAAAGTTGGCTGATGCTGAAGTCTCTGAGGAAGAGCAGCACAACTTGCTTAAGTATTTTGAGAGAAAGGAAAGGGAATACATGCGCCTTCAGAGGCATAAGATGGGGGCTGATGATTTTGAGCCCTTGACTATGATAGGGAAGGGTGCATTTGGAGAGGTCAGAATTTGCCGAGAGAAGACAACTGGTCACATATATGCTATGAAGAAGCTTAAGAAATCTGAGATGCTTCGCAGAGGCCAGGTTGAACATGTAAAAGCTGAGAGGAACCTACTCGCAGAAGTTGACAGCAATTGCATTGTGAAGCTTTATTTTTCCTTTCAAGATGAAGAATATTTATACCTCATAATGGAGTATCTACCGGGCGGTGATATGATGACGTTGCTCATGCGGAAGGATATACTGACAGAAGATGAGGCCAGGTTCTATGTTGGGGAGACTGTCCTAGCCATAGAGTCGATTCATAAACATAACTATATTCATAGGGATATCAAGCCTGATAACTTGCTGCTAGATAAAAATGGTCACATGAAATTATCAGATTTTGGATTATGTAAACCTCTAGACTGCAGTAATCTTCAGGAAAAGGACTTCTCTATTGGTGGCAATAGAAGTGGAGCCCTCCAGAGCGATGGGCGTCCTGTAGCTCCTAAAAGAACTCAGCAGGAGCAACTGCAGCATTGGCAGAAAAATAGGCGAATGCTTGCATATTCTACTGTTGGAACACCTGACTATATTGCCCCTGAAGTTCTACTGAAGAAAGGATATGGCATGGAATGTGATTGGTGGTCTCTGGGAGCTATAATGTATGAAATGCTAGTGGGGTATCCACCCTTTTATTCAGATGAACCGATGTTGACTTGTAGAAAGATAGTAAATTGGAGAACTCATTTAAAATTTCCAGAAGAAGCTAGACTATCAGCAGAAGCAAAGGATCTTATTAGTCGACTCCTATGTAATGTGGACCAGAGGCTTGGAACAAAAGGGGCTGATGAAATAAAGGCTCACCCATGGTTCAAAGGTATTGAATGGGACAAATTATACCAATTGAAAGCTGCTTTTATTCCTGAGGTCAATGATGAATTAGACACTCAAAATTTTGAGAAGTTTGAAGAGGTGGACAACCAAACCCTAACTCCCTCAAAATCAGGCCCATGGAGAAAGATGCTGTCGTCTAAAGATGTTAACTTTGTTGGGTACACATATAAGAACTTTGAAATTGTGAATGATGATCATCTACCTGGAATAGCTGAATTGAAGAAGAGCACAAAAAGTAAACGGCCTTCTATTAAGACCCTATTTGAGTGTCTAGCACAATGTCATTCTTGGTTAAGGCCCACAAAGGTTAAACAAAAGGGAAGTGATCTTAGATGA 1611 0.4134 MDPTGCWFNKFKLKDKMQSSKHKESAGIAKVGSNPPTDEEAPSNVTKQKVEAAKQFIENHYKKQMKDLQERKERRNMLEKKLADAEVSEEEQHNLLKYFERKEREYMRLQRHKMGADDFEPLTMIGKGAFGEVRICREKTTGHIYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYFSFQDEEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLQEKDFSIGGNRSGALQSDGRPVAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKIVNWRTHLKFPEEARLSAEAKDLISRLLCNVDQRLGTKGADEIKAHPWFKGIEWDKLYQLKAAFIPEVNDELDTQNFEKFEEVDNQTLTPSKSGPWRKMLSSKDVNFVGYTYKNFEIVNDDHLPGIAELKKSTKSKRPSIKTLFECLAQCHSWLRPTKVKQKGSDLR* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0163 536 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan8g0163 536 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 40 531 - -
Lan8g0163 536 Gene3D Phosphorylase Kinase; domain 1 90 202 - -
Lan8g0163 536 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0163 536 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0163 536 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Lan8g0163 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Lan8g0163 536 Gene3D Transferase(Phosphotransferase) domain 1 203 280 - -
Lan8g0163 536 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lan8g0163 536 SUPERFAMILY Protein kinase-like (PK-like) 97 471 IPR011009 -
Lan8g0163 536 Gene3D Transferase(Phosphotransferase) domain 1 317 436 - -
Lan8g0163 536 Coils Coil 61 88 - -
Lan8g0163 536 CDD STKc_NDR_like 117 482 - -
Lan8g0163 536 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan8g0163 536 Gene3D Phosphorylase Kinase; domain 1 437 447 - -
Lan8g0163 536 PANTHER SERINE/THREONINE-PROTEIN KINASE 40 531 - -
Lan8g0163 536 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0163 536 MobiDBLite consensus disorder prediction 17 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0163 Lan-Chr8 2712722 2721132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0163 1 514 AGC Kinase Gene Family AT4G14350 82.524 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lan8g0163 Pkinase 4.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0163 K08790 - gmx:100783095 976.852