Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0162 ATGGATCATGTTATTGGTGGAAAATTCAAGCTTGGGAGAAAGATTGGAGCTGGATCATTTGGAGAGCTTTATTTGGGTGTTAATGTACAAAGTGGAGATGAAGTGGCTGTCAAATTGGAACCTACAAAGACCAAGCATCCTCAACTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGGGGAACTGGAATACCCCATTTAAAATGGTTTGGAGTTGAGGGTGACTACAATGTTATGGTAATTGACCTTCTTGGACCAAGTCTTGAAGACTTGTTTAACTATTGCAACCGAAAATTATCTCTGAAAACAGTTCTGATGCTTGCAGATCAGTTGATAAACAGAGTTGAGTACATGCACTCCCGGGGTTTTCTGCATCGTGATATAAAGCCTGACAACTTTTTGATGGGTTTAGGCCGCAAGGCAAATCAGGTATATGCAATTGATTATGGCCTTGCAAAAAAGTATAGGGATCTTCAAACACATAAGCATATACCATACAGGGAAAACAAGAACCTCACTGGAACTGCTCGGTATGCAAGTGTTAATACTCACCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCACTTGGTTATGTGCTCATGTATTTTTTGAGAGGAAGTCTCCCTTGGCAAGGCATGAAAGGTGGAACTAAAAAGCAGAAGTATGACAAGATAAGTGAAAAGAAGATGCTTACTCCGATAGAGGTCTTATGCAAGTCATACCCATTAGAATTCACGACTTACTTCCATTATTGCCGATCGTTAAGGTTTGAAGATAAGCCTGATTATTCATATCTTAAGAGACTCTTTCGGGACCTATTCATTAGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACTATCTTGAAGTATCCACAAATCGGATCCAGTTCTCGAGCTCGACCAAGTGGGAAGCCAGCAATAAATCTGGGACTGTCAGGAGAGAGAGTAGAACGGCCTTCAGGTGTGCCAGAGGTTCGGGATAGATTTTCTGGTGCACTCGAGCAATTTGCAAGAAGGAATAGGCCGAATAGCTCTGGGCTTGGTCTGCATGGTGAAAATTCTAGGCATAGGTCTTCAGATGATGTGCCATCGTCCAAAGATGTGCAAGCTGATTCCGAGAGGACTCGGAGCTCTTCTCGTAATGGTAGTACCTCAAAACGGCCTGTCGTATCAAGCAGCCGACCAAGCACATCTGGTGAACCTAATGAAAGTCGTTCTAGCCGACTGCTCTCAAGCAGTGGCCGTCTGTCTACAACTCAGAGGATTCAAGCAGGTTTAGAGTCCAAAACATCCCTTACTCAGAGGATTCAAGCAGGTTTAGAGTCCAAAACATCCCTTACTCGTGCTTCAGGGTCGAGAGGCGGTCGAGACGATACATTCAGGAGCTTTGAACTTCTATCAATTGGTACAGGAAAAAGGAAATGA 1440 0.4271 MDHVIGGKFKLGRKIGAGSFGELYLGVNVQSGDEVAVKLEPTKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKLSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGMKGGTKKQKYDKISEKKMLTPIEVLCKSYPLEFTTYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRARPSGKPAINLGLSGERVERPSGVPEVRDRFSGALEQFARRNRPNSSGLGLHGENSRHRSSDDVPSSKDVQADSERTRSSSRNGSTSKRPVVSSSRPSTSGEPNESRSSRLLSSSGRLSTTQRIQAGLESKTSLTQRIQAGLESKTSLTRASGSRGGRDDTFRSFELLSIGTGKRK* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0162 479 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Lan8g0162 479 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Lan8g0162 479 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0162 479 PANTHER CASEIN KINASE-RELATED 1 450 - -
Lan8g0162 479 Gene3D Transferase(Phosphotransferase) domain 1 1 313 - -
Lan8g0162 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Lan8g0162 479 MobiDBLite consensus disorder prediction 300 466 - -
Lan8g0162 479 MobiDBLite consensus disorder prediction 342 357 - -
Lan8g0162 479 MobiDBLite consensus disorder prediction 358 379 - -
Lan8g0162 479 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0162 479 MobiDBLite consensus disorder prediction 380 457 - -
Lan8g0162 479 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 450 - -
Lan8g0162 479 CDD STKc_CK1_delta_epsilon 8 282 - -
Lan8g0162 479 SMART serkin_6 9 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0162 Lan-Chr8 2706109 2711691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0162 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 1.78e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lan8g0162 Pkinase 9.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0162 K08960 - jre:108991207 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0162 8 2706109 2711691 Lan20g0820 20 7311990 7317490 LSH