Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0146 ATGAGAATTGGAAATCTAGCACCTGAGCCAGAGAATAATAGACCAGGGAATGACATTGCAGTTCTTGATGTGAATGAACCCTTATTAGGGCATGATAGTGGTGCTGGTTTCGATGATTTCGACGGAGCTTCATTTTCCGGTGCTGTTTTTAACTTATCCACCACAATTATTGGTGCTGGAATCATGGCCTTGCCTGCAACTTTGAGAGAGTTGGGGATGGTGCCTGGTCTTGTTGCAATAATCATCATGGCTTTTTTGACCGAGAAGTCGATCGAGTTCTTGATTCGGTTCACAAGGGCAGGGAAGTCTTCCTCTTATGGAAGTTTGATGGGTGATTCCTTTGGGATATATGGAAAAGCTCTCATCCAAATATGTGTTATAGTCAATAACATCGGCGTGCTGATTGTTTACATGATTATTATCGGTGATGTGCTCTCGGGAACATCTGCAAATGGAAAACATCATCCCGGTATCTTTGAAGGATGGTTTGGTGCACACTGGTGGACAGGGCGGACATTTGTTGTCCTTTTAACAACACTTGCTATATTTGCACCACTGGCAAGCTTTAAGCGAATTGATTCATTGAGATTCACATCTGCCCTTTCAGTTGGTCTAGCAGTCGCTTTTCTTGTCATTGCCGTGGGAATCTCAATTGTCAAGATTTTAAGTGGAGGCATTGGGATGCCCAAACTATTTGCGGATGTTACTGATGTTTCATCGGTCTTTAAACTGTTTACTGTAGTCCCTGTGTTTGTGACTGCCTATATCTGCCACTACAATGTTCACACCATAGACAATGAACTTGAGGACTCCTCACAGATACAAGGGGTTGTACGAACTTCCCTTGCTCTATGCTCTTCAGTATACATATTGATAAGCTTCTTTGGGTTCCTCCTATTTGGCGAAGGAACTCTTGATGATGTCCTTGCCAATTTTGATACCGATCTTGGAATTCCTTTTAGTGCTGTGCTTAATGATGCTGTTCGTTTAAGCTATGCAGCACATCTCATGCTCGTATTTCCAGTTGTCTTCTTTCCGTTGCGGCTCAACATAGATGGTCTCCTCTTTTCTAAATCAAGGCCTTTGGTTCTGGATAACTTCAGATTTGCATCACTCACTATTTCCCTTATTGGTGTTATCTTCCTGGGAGCAAATTTCATCCCTAGCATTTGGGATGCTTTCCAGTTCACCGGCGCAACTGCTGCAGTTTGTATAGGATTCATATTTCCAGCTGCCATCATTCTTAGGGACCGATACGAAATAGCAACTAAAGGAGACAAGATTCTGTCTGTAATTATGATAGTTCTTGCAGTCGTCTCAAACGCCGTGGCTATATACAGCGATGCCTATGCCTTGATCAAGCAGAATAAAACCTCACGCGAATGA 1386 0.4286 MRIGNLAPEPENNRPGNDIAVLDVNEPLLGHDSGAGFDDFDGASFSGAVFNLSTTIIGAGIMALPATLRELGMVPGLVAIIIMAFLTEKSIEFLIRFTRAGKSSSYGSLMGDSFGIYGKALIQICVIVNNIGVLIVYMIIIGDVLSGTSANGKHHPGIFEGWFGAHWWTGRTFVVLLTTLAIFAPLASFKRIDSLRFTSALSVGLAVAFLVIAVGISIVKILSGGIGMPKLFADVTDVSSVFKLFTVVPVFVTAYICHYNVHTIDNELEDSSQIQGVVRTSLALCSSVYILISFFGFLLFGEGTLDDVLANFDTDLGIPFSAVLNDAVRLSYAAHLMLVFPVVFFPLRLNIDGLLFSKSRPLVLDNFRFASLTISLIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAIILRDRYEIATKGDKILSVIMIVLAVVSNAVAIYSDAYALIKQNKTSRE* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0146 461 Pfam Transmembrane amino acid transporter protein 43 443 IPR013057 -
Lan8g0146 461 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 8 456 - -
Lan8g0146 461 PANTHER AMINO ACID TRANSPORTER 8 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0146 Lan-Chr8 2480825 2484854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0146 3 461 Amino Acid or Auxin Permease AAAP Family AT3G30390 67.387 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0146 K14207 - gmx:100796345 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0105 9 1270576 1273766 Lan8g0146 8 2480825 2484854 LSH
Lan2g0099 2 868474 872097 Lan8g0146 8 2480825 2484854 LSH
Lan8g0939 8 11122765 11126721 Lan8g0146 8 2480825 2484854 PCT
Lan8g0146 8 2480825 2484854 Lan8g0939 8 11122765 11126721 PCT