Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0145 ATGCAGACAAAGGAAATCACAGGACTCAATTATTTACTCCCTTCAGACCCATCTCCTTACCCTAATAGCATGATCCAAAATAACATACCCACATTTCAACTTCAAAAATTCTCTAATCAATTCTATGGTTTACAAAACCCTACTCAAGTATTTGCAGACTTTAGTCCTCAATCATCATGTATCAGCAGCAATTCAACAACTTCTGATGAAGCAGATGAGCAACAACAATGCCTCATCAATGAGAGGAAACATAGAAGGATGATATCGAATCGAGAATCCGCGCGCCGTTCGCGAATGAGGAAGCAAAAACAACTTGATGAGCTATGGTCACAGGTGGTATGGCTTAGGAATGAGAATCATAAACTAGTAGATAAATTGAACCATGTGTTAGAATCTCATGATAAAACCCTTAAAGAAAATTCTCAGCTGAAAGAGGAAACTTCAGAACTTAGACAAATGATATGTGATATGAAGTTGCAAAGTCCATGCCATCCCTTTAGCCCCTTTCAAGATATACCATGCAACTCTCCTTTTCTCAATTCTGATTCCTCAAACTAA 558 0.3799 MQTKEITGLNYLLPSDPSPYPNSMIQNNIPTFQLQKFSNQFYGLQNPTQVFADFSPQSSCISSNSTTSDEADEQQQCLINERKHRRMISNRESARRSRMRKQKQLDELWSQVVWLRNENHKLVDKLNHVLESHDKTLKENSQLKEETSELRQMICDMKLQSPCHPFSPFQDIPCNSPFLNSDSSN* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0145 185 SUPERFAMILY Leucine zipper domain 82 131 IPR046347 GO:0003700|GO:0006355
Lan8g0145 185 Gene3D - 80 136 - -
Lan8g0145 185 Pfam bZIP transcription factor 82 139 IPR004827 GO:0003700|GO:0006355
Lan8g0145 185 CDD bZIP_plant_GBF1 83 134 IPR045314 GO:0003700|GO:0006355
Lan8g0145 185 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 185 IPR044521 -
Lan8g0145 185 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
Lan8g0145 185 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Lan8g0145 185 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Lan8g0145 185 PANTHER BZIP TRANSCRIPTION FACTOR 1 185 - -
Lan8g0145 185 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0145 Lan-Chr8 2432312 2433360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0145 18 171 bZIP Transcription Factor Family AT3G30530 60.510 1.65e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan8g0145 bZIP_1 5.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0145 - - aprc:113863596 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0153 5 1901897 1902612 Lan8g0145 8 2432312 2433360 PCT
Lan8g0942 8 11151697 11152509 Lan8g0145 8 2432312 2433360 PCT
Lan20g1464 20 21352918 21356203 Lan8g0145 8 2432312 2433360 PCT
Lan8g0145 8 2432312 2433360 Lan5g0153 5 1901897 1902612 PCT
Lan8g0145 8 2432312 2433360 Lan8g0942 8 11151697 11152509 PCT
Lan8g0145 8 2432312 2433360 Lan20g1464 20 21352918 21356203 PCT