Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0140 ATGGAGAAGCTAAGAAGTTTAGTACTTTGTTTTGTTACATTTTTCTTGTTTTGGAGCTTCACAAATGCTTTGCTTTCTCCAAAAGGAGTAAACTTTGAAGTGCAAGCTTTAATGGGCATAAAAAATGGTCTAGTAGATCCACATGGTGTTTTAGATAATTGGGATGCTGATGCAGTTGATCCATGTAGTTGGACTATGGTTACTTGTTCTGCTGAAAACTTGGTCATTGGATTGGGCACCCCAAGTCAAAGTTTATCTGGTACTTTATCTCCAAGTATTGGTAACTTAACAAATCTTCAAATTGTGCTGCTACAGAATAATAACATAAGTGGATCAATTCCTTCAGAGCTTGGAAAACTTTCTAAGCTTCAAACTCTTGATCTATCTAATAACTTCTTTAGTGGTGAAATTCCTTCCTCTTTGGGTCACCTTAAAAGCCTTCAATACCTGAGGGTCAATAATAACAGTATTGTTGGTGCATGCCCAGAATCACTGGCTAATATGACACAACTTGCTTTTCTTGACTTGTCCTACAATAATATTAGTGGCCCTGTACCTAGAATTTTGGCTAAATCATTCAACATTATTGGAAACCCCCTTGTTTGTTCTACTGGAAAAGAACCAAATTGTCATGGAATGACACTGAAGCCTATGTCAATGAACTTAACCAACACCGAGGATGGTTTATCTTCAGGCAGATCAAAAAGTCACAAAATGGCGATCGTTTTCGGCTTGAGCCTAGGATGCCTCTGCCTTATAGTTCTTGGTTTTGGACTTTTTCTTTGGTGGAGGCACAAGCATAATAAAGAAGCATTCTTTGATGTTAAAGACCGTCATCACGAAGAAATCTACCTCGGAAACTTGAAGATGTTCCAATTCAGAGAACTTCAGATTGCTACTCACAACTTTAGCAGCAAACACATACTTGGAAAGGGTGGTTTCGGAAATGTGTACAAAGGAGTTCTCTCAGATGGAACTCTTGTAGCTGTCAAGAGGCTTAAAGATGGCAATGCCGCAGGCGGAGAGATACAATTTCAAACAGAAGTCGAAATGATCAGTCTCGCGGTTCACCGAAATCTTCTTAGGCTATATGGGTTTTGTGTGACACCAACAGAAAGACTATTAGTTTACCCTTACATGTCTAATGGTAGTGTCGCTTCGCGTCTCAAAGGTAAGCCAGTCCTAGATTGGGGTACAAGGAAGCAAATTGCCTTAGGAGCTGCAAGAGGACTATTGTACCTTCATGAGCAATGTGATCCAAAGATAATTCATAGGGATGTAAAAGCTGCAAACATATTGCTTGATGATTATTGTGAAGCAGTAGTTGGAGATTTCGGATTGGCGAAGCTATTGGATCATCAAGATTCACATGTCACAACTGCAGTGAGAGGCACTGTAGGGCATATTGCCCCTGAGTATCTATCCACAGGACAATCCTCTGATAAAACTGATGTCTTTGGATTTGGCATTCTCCTACTTGAATTGATCACAGGCCAAAAGGCTCTAGAATTCGGAAAAACATCTAACCAAAAAGGAGCCATGCTCGATTGGGTAAAGAAAATCCATGTGGAGAAGCTTGAATTGCTTGTTGACAAGGATCTGAAGAGCAACTATGACAGGATTGAGCTAGAGGAAATGGTTCAAGTGGCTCTCTTGTGCACTCAATATCTTCCGAGCCATAGACCGAAAATGTCCGAAGTAGTTCGGATGCTCGAAGGTGATGGACTAGCAGAGAGATGGGAAGCTTCACAAAGAGCTGATACTTCAAAGTGCAAACCACATGAGTCCTCATTATCAGATAGATATTCTGATCTTACTGATGATTCTTTACTTCTAGTCCAAGCAATGGAGCTTTCAGGACCAAGGTGA 1869 0.4045 MEKLRSLVLCFVTFFLFWSFTNALLSPKGVNFEVQALMGIKNGLVDPHGVLDNWDADAVDPCSWTMVTCSAENLVIGLGTPSQSLSGTLSPSIGNLTNLQIVLLQNNNISGSIPSELGKLSKLQTLDLSNNFFSGEIPSSLGHLKSLQYLRVNNNSIVGACPESLANMTQLAFLDLSYNNISGPVPRILAKSFNIIGNPLVCSTGKEPNCHGMTLKPMSMNLTNTEDGLSSGRSKSHKMAIVFGLSLGCLCLIVLGFGLFLWWRHKHNKEAFFDVKDRHHEEIYLGNLKMFQFRELQIATHNFSSKHILGKGGFGNVYKGVLSDGTLVAVKRLKDGNAAGGEIQFQTEVEMISLAVHRNLLRLYGFCVTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSDKTDVFGFGILLLELITGQKALEFGKTSNQKGAMLDWVKKIHVEKLELLVDKDLKSNYDRIELEEMVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAERWEASQRADTSKCKPHESSLSDRYSDLTDDSLLLVQAMELSGPR* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0140 622 Gene3D Ribonuclease Inhibitor 30 212 IPR032675 -
Lan8g0140 622 SUPERFAMILY L domain-like 33 196 - -
Lan8g0140 622 Pfam Protein kinase domain 304 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0140 622 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Lan8g0140 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Lan8g0140 622 SMART serkin_6 303 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0140 622 Gene3D Phosphorylase Kinase; domain 1 272 379 - -
Lan8g0140 622 SUPERFAMILY Protein kinase-like (PK-like) 280 572 IPR011009 -
Lan8g0140 622 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 622 - -
Lan8g0140 622 MobiDBLite consensus disorder prediction 583 602 - -
Lan8g0140 622 ProSiteProfiles Protein kinase domain profile. 303 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0140 622 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 5 622 - -
Lan8g0140 622 Pfam Leucine Rich repeats (2 copies) 97 137 IPR025875 -
Lan8g0140 622 Gene3D Transferase(Phosphotransferase) domain 1 380 591 - -
Lan8g0140 622 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0140 Lan-Chr8 2341371 2345187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0140 9 622 Receptor kinase-like Gene Family AT5G16000 77.528 0.0 988
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lan8g0140 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0140 - - gmx:100797768 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0090 9 720612 724102 Lan8g0140 8 2341371 2345187 LSH
Lan20g1345 20 20144951 20149426 Lan8g0140 8 2341371 2345187 PCT
Lan8g0140 8 2341371 2345187 Lan20g1345 20 20144951 20149426 PCT