Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0133 ATGAAACTTTTTTTGTTCTTTCTCACATTCTCCTTCTTTTCCCAAACATTCCTTGTTTCCTCTGCTGCAACCTTGCCCCTCCAACTCATATCACTGCTTTCCATAAAATCCTCCCTCATAGATCCTTTCAAGTCCCTCCATGATTGGGACCCCTCCTCTGCTACATTATTCAAGTCTAACCCAATATGGTGTTCATGGACAGGTATCACATGTCACCCAAAAACATCTCAAATTATCACCCTTGACCTATCTCAGCACAATCTTTCAGGGACAATCTCACCTGAAATTAGGTACCTATCAAGCTTAAACCACTTGAATCTTAGTGGAAATGATTTTAGTGGAACTTTTCAAGCAGCAATTTTTGAACTTTCTGAGCTTAGGACTCTAGATATAAGTCACAATTCCTTCAATTCAACTTTCCCACCTGCAATATCAAAGCTCAAGTTTTTGAGGGTCTTCAATGCTTACAGCAACAACTTCACTGGCCCTCTGCCTCAAGAGTTAATCAGGCTTCGGTTTCTCGAGCAGCTCAACCTTGGTGGAAGCTACTTCAATGACAAAATTCCACAAGTGTATGGCAGTTTCTCAAGACTCAAGTTCTTGAATTTGGCAGGCAATGCATTGGAAGGTCCACTACCTCCTCAACTAGGCTTGTTATCACACCTAGAACACTTGGAAATCGGATACCAATCATTCTCGGGATCATTACCACCAGAACTGGCATTGCTATCCAATCTCAAATATTTAGATATCTCACTTTCTAACATTTCAGGGTTGATTCCACACAACATTGGCAACTTAACCATGTTGGAGACTTTATATCTCTTCAAGAATAGCTTAACTGGGGAAATTCCATCAAGCATAGGCAACTTGAAATCTCTCAAAGCTCTTGATCTTTCGGATAACCAACTAAATGGTTCAATTCCAGCACAAGTTTCAAATCTGAAGGAACTAACCATTTTGAATTTAATGCTAAACAAGCTAACAGGGGAGATACCTGAAGGGATTGGAGAGCTTCCATACCTTCACATTCTCAAAGCCTTCAACAACTCGCTCATCGGAACTCTTCCACAACAACTTGGTTTGAATGGGTTGCTCCAATGGTTAGATGTCTCCACCAATTCACTCCATGGTCCAATTCCACCATATGTTTGCAAAGGCAACAACCTAACCAAACTCATCCTCTTTGGCAACAACTTCCAAGGTTCTCTCCCAATTTCACTCTCTAGTTGCACCTCCTTGACTCGAGTTCGCATCCAAAACAACCAACTTAATGGTTCAATCCCTCCCGAATTTGCAATTCTCTCAAACCTAACCTACCTTGACATGAGCAACAACTACTTCAAAGGTGAAATTCCAGTAGATTTCGGCAATGCTGCTAAACTAGAGTACCTGAACATCTCAGGCAACTCTTTTGAATCAGCATTGCCGAATAACATATGGAATTCCACCAATCTTCAGATTTTCTCGGCCGCTGATTCCAAAATCAGCGGCCAAATTCCTGATTTTATAGGGTGCAGAAACATATACAGAATTGAATTACAAGGAAACTCACTCAATGGAACAATTCCATGGGACATTGGTCACTGCGATAAGCTTATTCAATTGAATTTGAGCAAGAACTCTCTCACCGGAATCATCCCTTGGGAAATTTCTACACTACCTTCCATCACCATCGTCGATCTCTCTCACAATTCACTCACCGGAACGATTCCTTCCAACTTCAACAACTGTTCCACGCTCGAGAATTTCGACGTCAGCTTCAACTCTCTCACCGGACCAATCCCTAGCTCCGGCATCTTCCCCAACCTCCACCCTTCCTCCTACTCCGGCAACCGCGGCCTCTGCGGCGGCGTTTTGGCAAAGCCCTGCGCGGCGGACGCACTCGCCGTAGGCAATAACGAGGTCGAGGTTCGGAAGCAGCAGCCGAAGCGAACCGCCGGCGCAATCGTTTGGATTGTGGCGGCGGCGTTTGGGATCGGACTCTTCGTTCTGGTAGCTGGGACCCGCTGTTTCCATGCGAATTATAACCGTAGATTCAACAACGAAAACACCCACGACATTGGCCCGTGGAAATTAACCGCATTCCAGCGGTTAAATTTCACGGCCGATGACGTGGCTGAGTGCTTGTCAGTCTCTAATAAGGTTTTAGGAATGGGGTCCACAGGCACTGTCTATCGAGTCGAAATGCCAGGTGGCGAGATCGTAGCTGTTAAAAAGCTTTGGGGAAAGCAAAAAGAGCATTTAATAAGAAGAAGAGGGGTTTTGGCTGAGGTGGAAGTGTTGGGAAATGTGAGGCATAGAAACATAGTAAGGTTACTAGGTTGTTGTAGCAATAGAGAATGTACCATGTTGTTGTATGAGTACATGCCTAATGGGAATTTGGATGATTTGTTACATGGCAAGAATAAGATTGATAATCTAATTTCGGATTGGTTTACAAGGTATAAGATTGCATTGGGTGTGGCTCAAGGAATTTGCTATCTTCATCATGATTGCGAACCGGTTATTGTTCATCGTGATCTCAAACCGAGCAATATACTATTGGATAGCGACATGGAAGCTAGAGTGGCTGATTTTGGTGTGGCCAAATTGATTCAAACCAATGAATCCATGTCTGTCATTGCTGGATCCTATGGCTACATTGCTCCAGAATATGCTTACACCCTGCAAGTGGATGAGAAGAGTGATATTTACAGCTATGGGGTGGTGTTGATGGAGATTTTAAGCGGAAAACGCTCCGTGGACTCGGAATTCGGCGACGGAAATAGCATCGTCGATTGGGTTAGATGTAAAATAAAGAGTAAAGATGGGATTGATGATATATTAGATAAGAATGTAGGAGCAGGGTGCAAGTCAGTGAGGGAAGAAATGATACAAATGCTTAGGATTGCATTGCTTTGTACAAGCAGAAACCCAGCAGATAGACCTTCAATGAGAGATGTAATGTTGATGCTACAAGAGGCCAAGCCAAAGAGAAAATTGCATGATAATGGTGTAGCTGAAAATGTGGTTGATAATGGTGATATTCCTTTGCCACAAAAACCAATTTTAGAAACCTAA 3063 0.4323 MKLFLFFLTFSFFSQTFLVSSAATLPLQLISLLSIKSSLIDPFKSLHDWDPSSATLFKSNPIWCSWTGITCHPKTSQIITLDLSQHNLSGTISPEIRYLSSLNHLNLSGNDFSGTFQAAIFELSELRTLDISHNSFNSTFPPAISKLKFLRVFNAYSNNFTGPLPQELIRLRFLEQLNLGGSYFNDKIPQVYGSFSRLKFLNLAGNALEGPLPPQLGLLSHLEHLEIGYQSFSGSLPPELALLSNLKYLDISLSNISGLIPHNIGNLTMLETLYLFKNSLTGEIPSSIGNLKSLKALDLSDNQLNGSIPAQVSNLKELTILNLMLNKLTGEIPEGIGELPYLHILKAFNNSLIGTLPQQLGLNGLLQWLDVSTNSLHGPIPPYVCKGNNLTKLILFGNNFQGSLPISLSSCTSLTRVRIQNNQLNGSIPPEFAILSNLTYLDMSNNYFKGEIPVDFGNAAKLEYLNISGNSFESALPNNIWNSTNLQIFSAADSKISGQIPDFIGCRNIYRIELQGNSLNGTIPWDIGHCDKLIQLNLSKNSLTGIIPWEISTLPSITIVDLSHNSLTGTIPSNFNNCSTLENFDVSFNSLTGPIPSSGIFPNLHPSSYSGNRGLCGGVLAKPCAADALAVGNNEVEVRKQQPKRTAGAIVWIVAAAFGIGLFVLVAGTRCFHANYNRRFNNENTHDIGPWKLTAFQRLNFTADDVAECLSVSNKVLGMGSTGTVYRVEMPGGEIVAVKKLWGKQKEHLIRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHGKNKIDNLISDWFTRYKIALGVAQGICYLHHDCEPVIVHRDLKPSNILLDSDMEARVADFGVAKLIQTNESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDSEFGDGNSIVDWVRCKIKSKDGIDDILDKNVGAGCKSVREEMIQMLRIALLCTSRNPADRPSMRDVMLMLQEAKPKRKLHDNGVAENVVDNGDIPLPQKPILET* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0133 1020 Pfam Leucine Rich Repeat 126 147 IPR001611 GO:0005515
Lan8g0133 1020 ProSiteProfiles Protein kinase domain profile. 711 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0133 1020 Pfam Protein kinase domain 714 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0133 1020 Pfam Leucine rich repeat 413 471 IPR001611 GO:0005515
Lan8g0133 1020 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 4 1002 - -
Lan8g0133 1020 SMART LRR_typ_2 460 483 IPR003591 -
Lan8g0133 1020 SMART LRR_typ_2 554 577 IPR003591 -
Lan8g0133 1020 SMART LRR_typ_2 99 118 IPR003591 -
Lan8g0133 1020 SMART LRR_typ_2 435 458 IPR003591 -
Lan8g0133 1020 SMART LRR_typ_2 291 315 IPR003591 -
Lan8g0133 1020 SMART LRR_typ_2 123 147 IPR003591 -
Lan8g0133 1020 SMART LRR_typ_2 195 219 IPR003591 -
Lan8g0133 1020 PRINTS Leucine-rich repeat signature 294 307 - -
Lan8g0133 1020 PRINTS Leucine-rich repeat signature 554 567 - -
Lan8g0133 1020 ProSitePatterns Protein kinases ATP-binding region signature. 717 740 IPR017441 GO:0005524
Lan8g0133 1020 SUPERFAMILY L domain-like 365 617 - -
Lan8g0133 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Lan8g0133 1020 Pfam Leucine rich repeat N-terminal domain 28 71 IPR013210 -
Lan8g0133 1020 SMART serkin_6 711 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0133 1020 Pfam Leucine Rich repeat 292 306 IPR001611 GO:0005515
Lan8g0133 1020 Gene3D Phosphorylase Kinase; domain 1 697 789 - -
Lan8g0133 1020 Gene3D Ribonuclease Inhibitor 336 630 IPR032675 -
Lan8g0133 1020 Gene3D Ribonuclease Inhibitor 92 335 IPR032675 -
Lan8g0133 1020 Gene3D Ribonuclease Inhibitor 28 91 IPR032675 -
Lan8g0133 1020 SUPERFAMILY RNI-like 81 425 - -
Lan8g0133 1020 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 1002 - -
Lan8g0133 1020 SUPERFAMILY Protein kinase-like (PK-like) 714 986 IPR011009 -
Lan8g0133 1020 Gene3D Transferase(Phosphotransferase) domain 1 790 1007 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0133 Lan-Chr8 2179522 2183902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0133 2 994 Receptor kinase-like Gene Family AT1G08590 43.346 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan8g0133 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0133 - - gmx:100809695 1576.61