Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0122 ATGAACCAAGTTGGTGTTGAAGGTTATTATTATTACAATTGTTTAGGATCTGATTTTGTGGTTAGGCACATGGCTGAAGAAGATGAATCTAGAGCACACAGTAGCACTACTCATAAAGAAGTTGAAGGTGATCTTCAAGCTGGTTCTACCTCAAAGGAAGAAGAAAAAGCAAACACCAACATCAATAACAATAGTAGTAATTGGCTTCAATTAAGTATAGGTAGTTGTCACCAGAGTAGCGCGACAGTGGTGACAACTACCAATAACCACCAAGTGTATCAGGGTGGTTATCATCAAATGGCTCCGATTACCGGTTCAGGTCTAGTCGAGCTAGACTTGTTACCCAGTAATAAGAGCCATAATATTAATTGGCCTTCTTCTTCACGACCGGGTTTGGAGTCGCCAACTACGTTTCCGGGCAGGAGTTACCATGGAGGGTCTAGTTTTGGTGCACCTTTACTTTTTGAACAAACTTCCATGTCCATGTCTATGTCCATACCAAGTGGTCCATTTAGTGCACAACCCTTTGGTAATATTCAACAACAACAACAATATCAACCTCAAGAAATGTTGAATTGGCAATTTCGTCCACTACCTCATTCTATGTCAATTATGCCATCTTCTTCTTCTGTTACTACCTCTTCTTCTTATTCATTACAATCTAGTTCATCTTTGAGGCCTTTTTCTCCTTTAGGATCTTATTATCAAACACCCTTTCATCATTTCCCTTCATCTTCTTCTTCATCTTCTGGGTTTGATCAATTTGATCATGTGGCTGGAACAAGCTCAGATGTCACTACTGTTAGAGTTGTTGATCCTCCAAGAAGACCTCATTCTGGAATATGGTTTATGCTACAAGCTTCTCAAAATCAAGCTAAAGAACCATTCTTGCCTCAAATAACTAAGAGCTACCTAAGAATCAAAGATGGAAGGATGACAATTAGGTTGCTATTGAAGTATCTGGTTAGCAAACTTAGAGTGGAAAATGAATCAGAGATAGAGATAACATGCAGAGGGCAACAACTTTTACCTTTCTTGACGTTACAGCATGTAAGGGATAATATTTGGACTCTAAGGGATACAACAAGGACTTTGCTTTCAGATTCATCATCAACCATGGATCATGTCATGGTATTGCATTATGGTAGAAGCATTTCTTAA 1161 0.3885 MNQVGVEGYYYYNCLGSDFVVRHMAEEDESRAHSSTTHKEVEGDLQAGSTSKEEEKANTNINNNSSNWLQLSIGSCHQSSATVVTTTNNHQVYQGGYHQMAPITGSGLVELDLLPSNKSHNINWPSSSRPGLESPTTFPGRSYHGGSSFGAPLLFEQTSMSMSMSIPSGPFSAQPFGNIQQQQQYQPQEMLNWQFRPLPHSMSIMPSSSSVTTSSSYSLQSSSSLRPFSPLGSYYQTPFHHFPSSSSSSSGFDQFDHVAGTSSDVTTVRVVDPPRRPHSGIWFMLQASQNQAKEPFLPQITKSYLRIKDGRMTIRLLLKYLVSKLRVENESEIEITCRGQQLLPFLTLQHVRDNIWTLRDTTRTLLSDSSSTMDHVMVLHYGRSIS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0122 386 PANTHER RING FINGER PROTEIN 13 384 - -
Lan8g0122 386 MobiDBLite consensus disorder prediction 30 51 - -
Lan8g0122 386 PANTHER RING FINGER PROTEIN 13 384 IPR044171 GO:0007275
Lan8g0122 386 MobiDBLite consensus disorder prediction 30 63 - -
Lan8g0122 386 Gene3D - 273 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0122 Lan-Chr8 1966123 1976922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0122 294 381 C3H Transcription Factor Family AT3G23060 36.264 2.39e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0122 - - lang:109325615 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0122 8 1966123 1976922 Lan8g0122 8 1966123 1976922 ECH
Lan2g0081 2 746018 753476 Lan8g0122 8 1966123 1976922 LSH