Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0115 ATGTATAGTTTTAAGTTTCATTGGAAAGTGTTGATTTTGTTGATTTCAGTTTTCTATTGCTTAGGAAACAATGACATGCAAGTTCAGTTGAATGATGATGTTCTTGGCTTAATTGTGTTCAAATCAGACCTTAATGACCCTTTTTCATATCTTACATCATGGAATGAAGATGATGTGAATCCATGTTCATGGAAGTTCATACAATGCAATCCTCAAAGTGGAAGAGTTTCTGAGGTTTCATTAGATGGATTAGGTTTATCTGGTAAGATAGGAATAGGCCTTGAAAAGTTGCAGCATCTTAAGGTATTGTCCCTTTCTCATAACAACTTTAGTGGAAGTTTTAGTCCTACACTTACTCTTCCTAGTACTATTCAAAGGTTGAATCTTAGTCATAATGGGTTGTTTGGTTTTATAACTACTACTTTTGTGAATATGAGTTCAATAAGGTTTCTTGATCTATCAGAAAATTCATTATCAGGAACAATCCCTGAGAATTTTTTTGATAGGTGTAGTTCCCTTCATTACCTTTCTTTAGGTGGTAATATGTTTGAAGGGTCAATTCCTAGCACAATTTCTAGATGTTTATCATTGAATAGTCTTAATCTTTCGAATAATCGGTTCGCGGGTTATGTCGATTTCGATGGGATTTGGTCATTAAAGAGGCTTAGGAATTTGGATCTGTCCAACAATGCTTTGAATGGGTACTTACCTAATGGAATTTCAGCCATACATAACTTGAAAGAGATTTTGTTACATGGTAACAAGTTTTCGGGTTCATTACCTAGTGATATTGGACTATGCCTGCATCTGAATAGATTGGATTTTAGTGATAATCAATTCAGTGGTGAGTTACCAGAATCACTTGGGAGGCTTAATTCTTTGAGCTATTTCAAGGCATCGGATAATCTTTTAACCGGTGAATTGCGGCAGTGGATCGGTAACATGACCAGTCTGGAATATCTTGAGCTTTCGAACAATCAATTCACTGGAAGGTTACCACAGTCATTGGTTTCATGCACGAAGTTATCAGTGATCAGGCTCGGAGGCAATGGTTTCAATGGCAGCATACCGGAAGGTTTGTTTGGTTTAGGATTGGAGGAAATCGACTTTTCGGACAACGATCTGATAGGTTCAATTCCAGCAGGCTCAAGCAGGCTATTGGAAACTCTAACCAATTTGGATCTTTCGAAGAACCACCTCGAGGGAATAATCCCTGCAGAAATTGGTCTTCTTTCAAAACTTCAATACTTGAATTTGTCTTGGAATGATCTTCATTCACAGATACCTCCAGAATTTGGTCTCCTTCAGAATCTAACAGTTTTAGATCTTCATAACATTGCCGCGTATGGTCCTATTCCAGCGGATATATGCGATTCAGGCAATTTGGCCATTCTCGAACTTGACGGAAATTCATTGAAAGGGTCTATTCCAGAAGCGATTGGGAATTGTTCATCTCTTTACTTATTGAGTTTGTCACACAATAATTTGACAGGTTCAATCCCAAGGTCAATGTCAAAGCTAAACAAGCTCAAAATCCTTAAACTAGAATTCAATGAACTAAGTGGAGAGATACCAATGGATCTTGGAATGCTTGAAAATCTTCTTGCTGTGAATATATCATATAACAGGCTCACAGGTAGGCTTCCAACAAGTACCGTATTTCGGAACTTGGACAAGACTTCATTGGAAGGAAACCTCGGTCTATGCTCGCCTCTACTTAAGGGTCCATGTAAGATGAATGTGCCAAAGCCACTAGTTCTTGATCCGAATGCACATAACAACCAAATAGGTCCTAATAGGGATAGAAGTGAATCATCTATGCCTAACACAATTCATCACCACAGGTTCCTTAGTGTTTCTGCCATTGTCGCAATTTCGGCATCATTTGTTATCATGTTAGGGGTGGTTGCTATTTGTCTAGTTAATGTTTCTGTGAGGAAACGGCTATCGTTTGTGGATAGCGCTTTGGAAAGCATGTGCTCGAGTTCTTCTAGATCAGGATGTCCACCCTCGGGAAAACTTATTATGTTCGATTCGCATTCCTCGACTGACGGGATCAGCAATCCAGAATCCTTGCTCAACAAGGCATCTGAGATTGGAGAAGGGGTATTTGGAACAGTTTACAAGATTCCACAGGGATCACATTGCAGAACGTTAGCAATGAAGAAGCTTATAACCTCGAACATAATCCAATATCCCGAAGACTTTGACAGGGAAGTTCGAATCCTAGGAAAAGCACGGCACCCGAATCTAATAGAACTGAAAGGATACTACTGGACTCCTCATCTACAGATTTTAGTAACAGAATATGCACCAAATGGTAGCTTGCAATCCAAGCTACATGAAAGGCTTCCTTCAACTCCACCCCTTTCATGGCCTAACAGATTCAAGATTTTGTTCGGAACAGCAAAGGGACTTGCTCATTTGCATCACTCGTACCGTCCACCGATCATCCACTACAACATAAAGCCAACCAACATTTTACTCGACGAAAACCACAACCCAAAGATATCAGATTTCGGGTTGTCCCGGCTTCTAACAAAGCTCGACAAACATGTGATGAGCAATAGGTTTCAAAGTGCACTAGGCTATGTTGCACCAGAGTTAGCATGCCAGAGCCTAAGGGTCAATGAGAAATGCGACGTGTATGGTTTCGGAGTAATGATCCTCGAATTAGTGACCGGAAGGAGGCCGGTCGAGTACGGAGAAGATAATGTGTTGATACTGAATGATCATGTGAGGGTGCTACTTGAACAAGGTAATGTGTTGGAATGTGTGGATCCAACAATGAATGAGTATCCAGATGATGAAGTACTTCCAATTCTGAAACTTGCAATGGTATGCACTTCTCAAATACCTTCAAGTAGACCTTCTATGACAGAAGTTGTGCAAATACTTCAACTCATTAAAACTCCTGTTCCTCATAGAATGGAAGTGTTCTAA 2943 0.3982 MYSFKFHWKVLILLISVFYCLGNNDMQVQLNDDVLGLIVFKSDLNDPFSYLTSWNEDDVNPCSWKFIQCNPQSGRVSEVSLDGLGLSGKIGIGLEKLQHLKVLSLSHNNFSGSFSPTLTLPSTIQRLNLSHNGLFGFITTTFVNMSSIRFLDLSENSLSGTIPENFFDRCSSLHYLSLGGNMFEGSIPSTISRCLSLNSLNLSNNRFAGYVDFDGIWSLKRLRNLDLSNNALNGYLPNGISAIHNLKEILLHGNKFSGSLPSDIGLCLHLNRLDFSDNQFSGELPESLGRLNSLSYFKASDNLLTGELRQWIGNMTSLEYLELSNNQFTGRLPQSLVSCTKLSVIRLGGNGFNGSIPEGLFGLGLEEIDFSDNDLIGSIPAGSSRLLETLTNLDLSKNHLEGIIPAEIGLLSKLQYLNLSWNDLHSQIPPEFGLLQNLTVLDLHNIAAYGPIPADICDSGNLAILELDGNSLKGSIPEAIGNCSSLYLLSLSHNNLTGSIPRSMSKLNKLKILKLEFNELSGEIPMDLGMLENLLAVNISYNRLTGRLPTSTVFRNLDKTSLEGNLGLCSPLLKGPCKMNVPKPLVLDPNAHNNQIGPNRDRSESSMPNTIHHHRFLSVSAIVAISASFVIMLGVVAICLVNVSVRKRLSFVDSALESMCSSSSRSGCPPSGKLIMFDSHSSTDGISNPESLLNKASEIGEGVFGTVYKIPQGSHCRTLAMKKLITSNIIQYPEDFDREVRILGKARHPNLIELKGYYWTPHLQILVTEYAPNGSLQSKLHERLPSTPPLSWPNRFKILFGTAKGLAHLHHSYRPPIIHYNIKPTNILLDENHNPKISDFGLSRLLTKLDKHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEQGNVLECVDPTMNEYPDDEVLPILKLAMVCTSQIPSSRPSMTEVVQILQLIKTPVPHRMEVF* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0115 980 ProSiteProfiles Protein kinase domain profile. 693 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0115 980 PRINTS Leucine-rich repeat signature 148 161 - -
Lan8g0115 980 PRINTS Leucine-rich repeat signature 219 232 - -
Lan8g0115 980 Gene3D Ribonuclease Inhibitor 29 166 IPR032675 -
Lan8g0115 980 Gene3D Ribonuclease Inhibitor 167 260 IPR032675 -
Lan8g0115 980 Gene3D Ribonuclease Inhibitor 364 451 IPR032675 -
Lan8g0115 980 Gene3D Transferase(Phosphotransferase) domain 1 775 976 - -
Lan8g0115 980 MobiDBLite consensus disorder prediction 589 608 - -
Lan8g0115 980 Gene3D Ribonuclease Inhibitor 261 363 IPR032675 -
Lan8g0115 980 Gene3D Ribonuclease Inhibitor 452 579 IPR032675 -
Lan8g0115 980 Pfam Leucine rich repeat 461 520 IPR001611 GO:0005515
Lan8g0115 980 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Lan8g0115 980 Pfam Leucine rich repeat 365 424 IPR001611 GO:0005515
Lan8g0115 980 ProSiteProfiles Leucine-rich repeat profile. 413 435 IPR001611 GO:0005515
Lan8g0115 980 PANTHER BNAA09G02190D PROTEIN 11 978 - -
Lan8g0115 980 CDD STKc_IRAK 699 969 - -
Lan8g0115 980 Pfam Leucine Rich Repeat 317 339 IPR001611 GO:0005515
Lan8g0115 980 SUPERFAMILY L domain-like 300 562 - -
Lan8g0115 980 SUPERFAMILY L domain-like 43 361 - -
Lan8g0115 980 Gene3D Phosphorylase Kinase; domain 1 693 774 - -
Lan8g0115 980 MobiDBLite consensus disorder prediction 592 608 - -
Lan8g0115 980 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lan8g0115 980 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 11 978 - -
Lan8g0115 980 SUPERFAMILY Protein kinase-like (PK-like) 696 974 IPR011009 -
Lan8g0115 980 Pfam Protein kinase domain 695 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0115 980 ProSitePatterns Protein kinases ATP-binding region signature. 699 722 IPR017441 GO:0005524
Lan8g0115 980 SMART LRR_typ_2 411 434 IPR003591 -
Lan8g0115 980 SMART LRR_typ_2 145 169 IPR003591 -
Lan8g0115 980 SMART LRR_typ_2 243 267 IPR003591 -
Lan8g0115 980 SMART LRR_typ_2 315 339 IPR003591 -
Lan8g0115 980 SMART LRR_typ_2 219 242 IPR003591 -
Lan8g0115 980 SMART LRR_typ_2 387 410 IPR003591 -
Lan8g0115 980 SMART LRR_typ_2 97 116 IPR003591 -
Lan8g0115 980 SMART LRR_typ_2 531 556 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0115 Lan-Chr8 1878536 1895744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0115 10 977 Receptor kinase-like Gene Family AT3G28040 61.416 0.0 1183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lan8g0115 Pkinase 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0115 - - pvu:PHAVU_008G017400g 1505.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0076 2 692130 695273 Lan8g0115 8 1878536 1895744 LSH