LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan8g0103	ATGGGAAGAAAAAAGACAGAGGATGCAGTTTCATCTAATAAGAAGGAAAAATTTAGTGTCTCTGCCATGCTGGCCAGTATGGATGAAAAACCGGATAGATCGAAAAAGGTTGCTTCTTCCTCAAGCAAGCCGAAGGCGAAGGTGAAGTCTTCGGCGTACACTGATGGCATTGATCTTCCCCCCTCCGACGATGAAGAAGATGTTTTGGAAGAGGAGGAACAGCAAAATAGTACATCGAAACGGCCTGATGTGAAGCAACTTGAGGTATCTATTGCGGAAAAGGAGTTGAAGAAGCGCGAAAAGAAGGATATTTTAGCTGCGTACGTTGTCGAGCAGGCAAAGAAGGAAGCTCTTAAGGATGATCGCGATGCTTTCGCTGTTGTTATCGGAAGCAGGGCGTCTGTTCTTGATGGAGAAGATGATGCTGCTGATGCTAATGTCAAAGATATAGCGATAGATAATTTCTCTGTGTCGGCCCGGGGAAAAGAGTTGATGAAGAATGCTTCGGTGAGGATATCTCATGGGAAGAGGTATGGTTTGGTTGGGCCCAACGGAAAGGGCAAATCCACCCTATTGAAGCTTCTTGCTTGGAGGAAGATACCGGTGCCTAAGAATATTGATGTGCTTCTGGTTGAACAGGAGGTTGTTGGTGATGATAAAACAGCGCTTGAAGCTGTTGTTTCGGCTAATGAAGAACTTGTTAAAATTCGACAAGAAGTTGCTTATCTGCAAAGTGAAACTAGTGTTGAAGGAAGTGTAGACAAAGATAATAATGATGAGGAAGATGATGCAGGAGAGAAGCTAGCTGAGCTCTACGAGAAATTACAGTTGATGGGATCTGATGCTGCTGAAGCTCAGGCATCGAAGATTTTAGCTGGTCTGGGTTTTACAAAGGATATGCAGGTCCGTCCTACGAAATCTTTCAGTGGTGGTTGGAGGATGAGAATTTCTCTAGCTCGAGCACTTTTTGTGCAGCCGACTCTATTATTGCTCGACGAACCCACAAATCATCTTGACCTGAGAGCTGTTCTATGGTTAGAGGAGTACTTGAGCCATTGGAAGAAGAGTTTGGTCGTTGTCTCACACGATAAAGATTTCCTGAATACAGTTTGCTCTGAGATTATTCATCTGCATGATTTGAAACTCCATGTCTATCGTGGAAATTTTGATTCTTTTGAGAGTGGGTATGAACAGCGTCGTAAAGAGATGAATAAGAAGTACGAGGTTTATGACAAGCAATTGAAAGCAGCTAAAAGGAGTGGAAACCGGACTCAGCAGGAAAAGGTGAAGGATCGAGCTAAGTTTGCAGCAGCCAAGGAAGCATCTAAAAGCAAGGGGAAGGGAAAGGTTGATGAGGATGATGCTCCGCAAGAGGCGCCACGGAAATGGAGGGACTACAGTGTTGAGTTCCACTTTCCTGAACCTACTGAGCTCACACCTCCACTTTTGCAGCTTATTGAAGTGAGCTTCAGCTACCCGAATCGGGAGGATTTTAGACTCTCAAATGTTGATGTTGGCATTGATATGGGGACTCGTGTTGCCATTGTTGGTCCTAATGGAGCTGGAAAGTCAACACTGTTGAATCTTCTAGCTGGTGATTTGGATCCAAGTGAGGGTGAAGTTCGAAGGAGTCAGAAGTTGAGAATAGGAAGATATTCCCAACACTTTGTGGACCTTCTAACGATGGATGAAACACCTGTTCAGTATCTTCTTCGACTCCATCCTGACCAGGAAGGACTTAGCAAGCAGGAGGCTGTCCGTGCTAAACTCGGTAAGTTTGGATTACCTAGTCATAACCATCTTACCCCTATTGCCAAACTGTCTGGAGGGCAGAAATCTCGTGTTGTCTTCACGTCGATATCCATGTCAAAACCCCACATTTTATTGTTAGATGAACCCACAAATCATCTAGATATGCAGAGTATCGATGCATTGGCTGATGCACTGGATGAATTCACTGGTGGAGTTGTTCTTGTGAGTCATGATTCTAGATTGATATCACGTGTATGTGATGATGAAGAGAGGAGTCAAATCTGGGTTGTTGAAGATGGTACTTGCAGAACTTTCCCCGGAACATTTGATGATTACAAGAATGAGTTGTTGAGAGAAATTAAAGCTGAAGTTGAGGATTGA	2133	0.4402	MGRKKTEDAVSSNKKEKFSVSAMLASMDEKPDRSKKVASSSSKPKAKVKSSAYTDGIDLPPSDDEEDVLEEEEQQNSTSKRPDVKQLEVSIAEKELKKREKKDILAAYVVEQAKKEALKDDRDAFAVVIGSRASVLDGEDDAADANVKDIAIDNFSVSARGKELMKNASVRISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVKIRQEVAYLQSETSVEGSVDKDNNDEEDDAGEKLAELYEKLQLMGSDAAEAQASKILAGLGFTKDMQVRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLSHWKKSLVVVSHDKDFLNTVCSEIIHLHDLKLHVYRGNFDSFESGYEQRRKEMNKKYEVYDKQLKAAKRSGNRTQQEKVKDRAKFAAAKEASKSKGKGKVDEDDAPQEAPRKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLDPSEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKSRVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSQIWVVEDGTCRTFPGTFDDYKNELLREIKAEVED*	711

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan8g0103	710	Coils	Coil	226	246	-	-
	Lan8g0103	710	PANTHER	ATP-BINDING TRANSPORT PROTEIN-RELATED	3	709	-	-
	Lan8g0103	710	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	462	697	IPR027417	-
	Lan8g0103	710	SMART	AAA_5	509	685	IPR003593	-
	Lan8g0103	710	SMART	AAA_5	174	380	IPR003593	-
	Lan8g0103	710	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	151	389	IPR027417	-
	Lan8g0103	710	ProSiteProfiles	ATP-binding cassette, ABC transporter-type domain profile.	483	708	IPR003439	GO:0005524
	Lan8g0103	710	CDD	ABCF_EF-3	150	381	-	-
	Lan8g0103	710	Pfam	ABC transporter	500	635	IPR003439	GO:0005524
	Lan8g0103	710	Pfam	ABC transporter	166	336	IPR003439	GO:0005524
	Lan8g0103	710	ProSitePatterns	ABC transporters family signature.	308	322	IPR017871	GO:0005524
	Lan8g0103	710	Gene3D	-	149	432	IPR027417	-
	Lan8g0103	710	Gene3D	-	447	710	IPR027417	-
	Lan8g0103	710	MobiDBLite	consensus disorder prediction	1	85	-	-
	Lan8g0103	710	ProSiteProfiles	ATP-binding cassette, ABC transporter-type domain profile.	150	411	IPR003439	GO:0005524
	Lan8g0103	710	Coils	Coil	400	420	-	-
	Lan8g0103	710	MobiDBLite	consensus disorder prediction	417	459	-	-
	Lan8g0103	710	PANTHER	BNAA06G39310D PROTEIN	3	709	-	-
	Lan8g0103	710	CDD	ABCF_EF-3	483	685	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan8g0103	Lan-Chr8	1707640	1709791	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan8g0103	483	684	Calmodulin-binding Proteins	AT2G36910	28.054	1.82e-11	65.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan8g0103	K06184		-	gmx:100806865	1164.44