Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0102 ATGCGCATGGAGATAACGTACGCATCACCGAGTTCCCCTAATCTCACGGCCCTCGCCGCCATGCCGTCGTCAGCCACCACAAAACGCACCGTCAGAATCATCCCGGTGCAGCACCCGACGGTGACAAATTCTTCTTCTTCATCGTCGTCATCGTCGTTCGTGTTTTCAGTGTGGTTATCGAAGCTTAGGAAAAAGACGTGGATGGAATGGATCGAATTGTTCTTCCCGTGTTTCCGATGGATTCGTGTGTATAATTGGAGAGAGTATTTTCAGGTTGATTTTATGGCTGGTATCACTGTTGGAGTTATGCTTGTTCCTCAGTCAATGTCATATGCAAAATTAGCAGGGCTACAACCAATATATGGACTATACTCTTGTTTCGTGCCGATATTTGTTTATGCCATATTTGGGTCTTCTCGCCAGCTTGCTGTTGGCCCAGTAGCCTTGGTTTCTCTCTTGGTCTCTAATGTGCTAAGTGGCATAGCTGATCCATCCAGTGAATTATACACAGAGTTAGCAATATTATTGGCTCTTATGGTTGGGATACTGGAATCCATAATGGGACTCTTGAGGCTAGGATGGCTGATTCGTTTCATTAGCCATTCAGTGATATCTGGCTTTACAACTGCTTCAGCTATTGTGATTGGTTTATCTCAAGTGAAATACTTCTTGGGGTATAGTATTGACAAAAGTAGCAAGATCATACCACTGGTTGAGAGTATAATTGCTGGAGCAGATAAGTTTTCATGGCCCCCTTTTGTGATGGGATCAATCACCCTTGCAATATTGCTTGTCATGAAGCACCTGGGAAAATCGAGGAAGCACTTGCGGTTCTTGAGAGCATCCGGTCCTCTCACAGCAGTAACTTTGGGAACAGTTTTTGTATATATATTCCATCCATCATCAATTTCTGTGGTGGGAAATATACCTCAGGGCCTTCCAAAATTTTCTGTTCCTAGAGCTTTTGAGTATGCAGAGTCCTTAATTCCAACCGCTTTTCTCATAACTGGTGTGGCTATATTGGAATCAGTGGGAATTGCCAAGGCATTAGCAGCAAAAAATGGCTATGAGTTGGATTCAAATCAAGAGTTGTTTGGTCTTGGTGTTTCCAATATTCTTGGTTCGTTCTTTTCAGCATACCCCACCACTGGATCCTTTTCAAGATCAGCTGTCAACCATGAAAGTGGTGCAAAATCAGGAGTATCTGCGATTGTTTCAGGAATTCTAATGACCTGTGCACTTATGTTCTTAACTCCACTATTTGAGTCCATACCTCAGTGTACTCTTGCTGCCATTGTGATCTCTGCTGTGATAGGTCTGGTAGATTATGATGAGGCCATTTTTTTGTGGCGCGTAGATAAGAAAGATTTTCTTCTTTGGACCATTACCAGCACAACTACATTATTCCTTGGTATTGAGATTGGCGTGATTATTGGGGTTGGTGTTTCACTTGCTTTTGTCATTCATGAGTCAGCAAATCCACATATCGCTATTTTGGGACGTTTGCCAGGAACAACTGTTTATAGAAATGTTAAACAATATCCTGAAGCATATACATACAATGGAATTGTAATTGTTCGTATTGATGCTCCTATTTATTTTGCAAACACAAGTTACATAAAGGACAGGTTGCGAGAATATGAAGTTACTGCTGATACTTCTACAAGACACGGACCCGATGTTGAAAGAATTTATTTTGTTATTCTAGAGATGGCTCCTGTGACCTATATAGACTCTAGTGCTGTTCAGGCTTTGAAGGACTTGTATCAGGAGTACAAATTACGCGACATTCAGATTGCAATATCCAATCTAAACCCAGATGTTCTACTTACACTGTCTAAATCTGGTCTGATGGAGTTGATAGGCAAGGAATGGTACTTTGTGAGAGTACATGATGCTGTTCAAGTTTGCTTGCAGCATGTGCGAAGTTTCGAAAGGGGATCTAACAACAGTTCACAAACATCGCTCGCTTTATCAGACGATAAACCGAGTTCCTATGGGCAGTTACTAAAACAAACAGGAGAGAACCTTCCAATTTCCGACTTGGAGTCTGGTAAGGGAAGATCTCCACTTTCCATGGACAGAGATTCTCACTTGGAGCCATTATTGTCAAAAGAACATTGA 2124 0.419 MRMEITYASPSSPNLTALAAMPSSATTKRTVRIIPVQHPTVTNSSSSSSSSSFVFSVWLSKLRKKTWMEWIELFFPCFRWIRVYNWREYFQVDFMAGITVGVMLVPQSMSYAKLAGLQPIYGLYSCFVPIFVYAIFGSSRQLAVGPVALVSLLVSNVLSGIADPSSELYTELAILLALMVGILESIMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQVKYFLGYSIDKSSKIIPLVESIIAGADKFSWPPFVMGSITLAILLVMKHLGKSRKHLRFLRASGPLTAVTLGTVFVYIFHPSSISVVGNIPQGLPKFSVPRAFEYAESLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNILGSFFSAYPTTGSFSRSAVNHESGAKSGVSAIVSGILMTCALMFLTPLFESIPQCTLAAIVISAVIGLVDYDEAIFLWRVDKKDFLLWTITSTTTLFLGIEIGVIIGVGVSLAFVIHESANPHIAILGRLPGTTVYRNVKQYPEAYTYNGIVIVRIDAPIYFANTSYIKDRLREYEVTADTSTRHGPDVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNLNPDVLLTLSKSGLMELIGKEWYFVRVHDAVQVCLQHVRSFERGSNNSSQTSLALSDDKPSSYGQLLKQTGENLPISDLESGKGRSPLSMDRDSHLEPLLSKEH* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0102 707 CDD STAS_SulP_like_sulfate_transporter 514 630 - -
Lan8g0102 707 Pfam Sulfate permease family 90 463 IPR011547 GO:0016021
Lan8g0102 707 MobiDBLite consensus disorder prediction 688 707 - -
Lan8g0102 707 PANTHER SULFATE TRANSPORTER 4.1-RELATED 37 660 - -
Lan8g0102 707 MobiDBLite consensus disorder prediction 647 707 - -
Lan8g0102 707 Gene3D STAS domain 493 640 IPR036513 -
Lan8g0102 707 SUPERFAMILY SpoIIaa-like 515 637 IPR036513 -
Lan8g0102 707 MobiDBLite consensus disorder prediction 647 679 - -
Lan8g0102 707 Pfam STAS domain 514 633 IPR002645 -
Lan8g0102 707 TIGRFAM sulP: sulfate permease 76 633 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan8g0102 707 ProSiteProfiles STAS domain profile. 513 637 IPR002645 -
Lan8g0102 707 PANTHER SULFATE TRANSPORTER 37 660 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0102 Lan-Chr8 1693735 1706540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0102 5 643 Inorganic Solute Cotransporters AT5G13550 72.462 0.0 952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0102 K18059 - gmx:100794754 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0056 9 396318 406363 Lan8g0102 8 1693735 1706540 LSH