Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0086 ATGGCAAAAAATGATGAGAGCATTGCTATTGGAATAGACCTTGGTACTACATATTCATGTGTTGCAGTATGGGAGAAGCAACACAATCGAGTTGAAATCATTCACAATGACCATGGCAACAAAATTACTCCTTCTTTTGTTGCCTTCACAGATGACCAAAGATTGATTGGAGATGCTGCTAAGAATCAGGCTGCAATTAACCCAACTAACACTATCTTTGATGCTAAGAGGTTAATTGGTAGAAAATATAGTGACCCTATTATTCAGAATGATTTGTTGTTGTGGCCATTCAAGGTCATAAACAGTAATGATGAAAAACCAATGATTGTAGTTAATTATAAGGGTCAAGAGAAGCACCTCTCTGCTGAAGAAATATCATCTATGATCCTCTCAAAGATGGGCGAGATTGCAGAGTCATACTTGGAGTCACCTGTAAAGAATGCAGTAGTTACAGTGCCTGCTTATTTCAATGACTCTCAACGTCAAGCGACGAAAGACGCTGCTACTATCGCTGGCCTTAATGTCATGCGGATAACCAATGAACCTACTGCTGCTGCTCTTGCATATGGTCTTGACAAGAGAGCTAATTGTGTCGATGAGAGAAATGTTTTTGTTTTTGACCTCGGTGGTGGTACTTTTGATGTGTCTCTACTTACAATTAAGGGTAAGATTTTCGAAGTTAAGGCCACAGCTGGAGACACTCACCTAGGAGGGCTGGACTTCGATAACAGAATGGTAAACTATTTTGTACAGGAGTTCAAAAGGAAAAACAATGTGAACATTAGTGGAAATCCAAGAGCTCTACGGAGGTTGAGGAGTGCGTGTGAGAGAGCGAAAAGGGTACTCTCTTTCGCTTCTAATACCACCATTGAGGTGGATTCGTTATTGCAGGGCATTGACTTCTGTTCATCAGTCACTCGTGCGAAGTTTGAGCAACTCAACATTGACCTCTTCAAGAAGTGCATGGAGCCAGTGGAGCAGTGTCTTAGGTTTGCAAAGATGGAAAAGAGCAGTGTTCATGATGTTGTACTTGTTGGTGGCTCTACAAGGATTCCTAAAGTTCAGAAGCTATTGCAGGATTTCTTCAACGGAAAGGAACTTTGCAACAGCATCAACCCGGATGAGGCCGTTGCTTATGGTGCTGCTGTCCAAGCAGCTATGTTAAGTGGTGAAGGCAATGAGATGGTTCAAGATTTGTGTCTTTTGGATGTCACCCCATTGTCTCTAGGTTTAGAGACTAGTGGAGGTCTTATGACAGTATTAATTCCTAGGAATACTCCAATTCCTACTAAAAGGGAGCTAGTATTCTCTACATATTCAGATTACCAATCTAGTGTCTTGATTCAAGTTTATGAGGGTGAAAGAACAAGAGCTAAGGATAACAATTTGCTTGGTAAATTTGAGTTTTCCGGCATTCAGTTGGTACCCCGAGGTGTTCCTCAAATCACTGTCTGCTTTGATATTGATGCCAATGGTATTTTGAATGTCTCTGCCGAGAACAAAACTACCAGCCAGAAGAACATGATTACCATTACGAATGACAAAGGAAGGTTGTCAAAGGAAGAAATTGAGAGGATGATTCAAGAAGCTGAAAAATACAAGTTTGAAGATGAGGAACATAAGAAAAAGATTGAGGCCAAGAACGCCTTGGAGAAATATGCATACAACATGACAAACACCATAGAGGATTATAAGATCAGTTCAAAGCTTTCTGCAACAGACAAGGCAAAGATTGAGGATGCAATTCAGAAGGCATTTCAATGGCTTGATGCAAATCAGCATGCTGAAGTTGATGAATTTGATGGCAAGGTGAAGGAGCTTGACAGCATATGCAATCCTATTATGGTCAAGATGTACCAAGGCGGTGATGACACAGATCGTGATGATCCATCTACTTTTTCTGGCCACAAAATTGAGCAGGTTGATTAA 1929 0.4085 MAKNDESIAIGIDLGTTYSCVAVWEKQHNRVEIIHNDHGNKITPSFVAFTDDQRLIGDAAKNQAAINPTNTIFDAKRLIGRKYSDPIIQNDLLLWPFKVINSNDEKPMIVVNYKGQEKHLSAEEISSMILSKMGEIAESYLESPVKNAVVTVPAYFNDSQRQATKDAATIAGLNVMRITNEPTAAALAYGLDKRANCVDERNVFVFDLGGGTFDVSLLTIKGKIFEVKATAGDTHLGGLDFDNRMVNYFVQEFKRKNNVNISGNPRALRRLRSACERAKRVLSFASNTTIEVDSLLQGIDFCSSVTRAKFEQLNIDLFKKCMEPVEQCLRFAKMEKSSVHDVVLVGGSTRIPKVQKLLQDFFNGKELCNSINPDEAVAYGAAVQAAMLSGEGNEMVQDLCLLDVTPLSLGLETSGGLMTVLIPRNTPIPTKRELVFSTYSDYQSSVLIQVYEGERTRAKDNNLLGKFEFSGIQLVPRGVPQITVCFDIDANGILNVSAENKTTSQKNMITITNDKGRLSKEEIERMIQEAEKYKFEDEEHKKKIEAKNALEKYAYNMTNTIEDYKISSKLSATDKAKIEDAIQKAFQWLDANQHAEVDEFDGKVKELDSICNPIMVKMYQGGDDTDRDDPSTFSGHKIEQVD* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0086 642 Pfam Hsp70 protein 9 620 IPR013126 GO:0005524|GO:0140662
Lan8g0086 642 PANTHER HEAT SHOCK PROTEIN 70KDA 1 627 IPR013126 GO:0005524|GO:0140662
Lan8g0086 642 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Lan8g0086 642 MobiDBLite consensus disorder prediction 619 642 - -
Lan8g0086 642 SUPERFAMILY Actin-like ATPase domain 199 390 IPR043129 -
Lan8g0086 642 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 546 IPR029047 -
Lan8g0086 642 SUPERFAMILY Actin-like ATPase domain 7 193 IPR043129 -
Lan8g0086 642 PRINTS 70kDa heat shock protein signature 8 21 - -
Lan8g0086 642 PRINTS 70kDa heat shock protein signature 38 50 - -
Lan8g0086 642 PRINTS 70kDa heat shock protein signature 60 68 - -
Lan8g0086 642 PRINTS 70kDa heat shock protein signature 148 168 - -
Lan8g0086 642 PRINTS 70kDa heat shock protein signature 211 221 - -
Lan8g0086 642 PRINTS 70kDa heat shock protein signature 339 355 - -
Lan8g0086 642 PRINTS 70kDa heat shock protein signature 371 391 - -
Lan8g0086 642 PRINTS 70kDa heat shock protein signature 398 417 - -
Lan8g0086 642 PRINTS 70kDa heat shock protein signature 479 495 - -
Lan8g0086 642 Gene3D - 194 368 - -
Lan8g0086 642 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 396 551 IPR029047 -
Lan8g0086 642 MobiDBLite consensus disorder prediction 621 642 - -
Lan8g0086 642 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 545 623 IPR029048 -
Lan8g0086 642 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Lan8g0086 642 Gene3D Actin; Chain A, domain 4 237 320 - -
Lan8g0086 642 Gene3D - 547 621 IPR029048 -
Lan8g0086 642 Gene3D - 10 386 - -
Lan8g0086 642 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 1 627 - -
Lan8g0086 642 Gene3D - 73 128 - -
Lan8g0086 642 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0086 Lan-Chr8 1523155 1525830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0086 1 642 Calmodulin-binding Proteins AT3G12580 76.227 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0086 K03283 - qsu:111985979 979.933