Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0058 ATGAGTTGCTTTTCATATTTCAAGCACAAAACAAGAAAGTTAAGGCAAAGATCAGCACCTGAGCTCAATGATCAAGAGAAATCCTTATACTCAGGGGTTGATAGGTCATCCGGTTCGACCGCTTCGCCACGTGGCATACCCGAATTGTATGAGGAGAAGGCTCATAATTTAAGGGTGTTTTCTTACTTAGAGCTAAGGCATGCAACTAATGATTTTAGTAGACTTTTTAAGATAGGAGAAGGTGGTTTTGGAAGTGTATATAAAGGTACAATCAAACCTGTTGGTGGAAAAGGGGATCCTATTTTAGTTGCAATCAAAAGGCTTAACCAAGATGGATTACAGGGTCATAAGCAATGGTTGGCAGAAGTTCAGTTTCTTGGTGTTGTTGAGCACCCAAATCTTGTCAAACTCCTCGGGTATTGTGCCGTGGATGGTGAAAGAGGGATTCAGAGACTACTTGTATATGAGTTCATGTCAAATAGAAGTTTAGAATCACATCTTTTCAATAAAGCATATGACCCTCTTCCTTGGAAAAGAAGACTTGAGATAGCCCTTGGAGCAGCTCAAGGATTAGCTTATCTGCATGAAGAGTCTGAAGTTCAGGTGATATATCGAGATTTTAAATGCTCAAATGTATTGTTGGATGAAAATTTTAAGCCAAAACTTTCGGATTTTGGACTAGCGCGGGAGGGGCCAATAGCTGGGCATACACATGTTTCCACTGCTGTGATGGGGACATTTGGTTATGCTGCTCCAGATTATATTCAAACTGGCCATCTCACCACCAAGAGTGACGTGTGGAGTTTCGGCGTGGTTCTATACGAAATACTTACTGGAAGGCGTGCATTGGAGAGAAACAGACCGAAACCAGAACAAAAACTATTGGAATGGGTGAAACAGTACCCTCCTGAAAGCAAAAGGTTTGTCTTGTTGATGGATCCAAGGCTTATAGGCCAGTATTCCATTTATGGAGCGCAAGAACTTGCGAAGCTCGCAGATGATTGTCTGCATAAGAGTGCAAAAGATCGGCCAACAACGAGTCAGGTGGTAGAGAGATTGAAGCAGATAATCCAAGTTTCTGAGGATGAATCATTTGTAGAGAAAAGCATTATTGACACATCTGATGATGAACCTCTTGAGCCCGAAAAAAACCCGGATGAATCAACCCCTTCAGAGTCATGGAAAAGGAGGATGGCCCATCTAGCAAAACTCGGTGAACGCGTGGAAAGTGATAGTAGAAGAAAATTCTTGATCCTACAAAATGCTAAAGTTCCAAAATAG 1281 0.4176 MSCFSYFKHKTRKLRQRSAPELNDQEKSLYSGVDRSSGSTASPRGIPELYEEKAHNLRVFSYLELRHATNDFSRLFKIGEGGFGSVYKGTIKPVGGKGDPILVAIKRLNQDGLQGHKQWLAEVQFLGVVEHPNLVKLLGYCAVDGERGIQRLLVYEFMSNRSLESHLFNKAYDPLPWKRRLEIALGAAQGLAYLHEESEVQVIYRDFKCSNVLLDENFKPKLSDFGLAREGPIAGHTHVSTAVMGTFGYAAPDYIQTGHLTTKSDVWSFGVVLYEILTGRRALERNRPKPEQKLLEWVKQYPPESKRFVLLMDPRLIGQYSIYGAQELAKLADDCLHKSAKDRPTTSQVVERLKQIIQVSEDESFVEKSIIDTSDDEPLEPEKNPDESTPSESWKRRMAHLAKLGERVESDSRRKFLILQNAKVPK* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0058 426 MobiDBLite consensus disorder prediction 15 45 - -
Lan8g0058 426 Gene3D Transferase(Phosphotransferase) domain 1 158 377 - -
Lan8g0058 426 Pfam Protein tyrosine and serine/threonine kinase 77 353 IPR001245 GO:0004672|GO:0006468
Lan8g0058 426 CDD STKc_IRAK 78 356 - -
Lan8g0058 426 PANTHER OS07G0495150 PROTEIN 21 410 - -
Lan8g0058 426 MobiDBLite consensus disorder prediction 23 43 - -
Lan8g0058 426 MobiDBLite consensus disorder prediction 370 394 - -
Lan8g0058 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Lan8g0058 426 ProSitePatterns Protein kinases ATP-binding region signature. 78 106 IPR017441 GO:0005524
Lan8g0058 426 PANTHER OS01G0588500 PROTEIN-RELATED 21 410 - -
Lan8g0058 426 SUPERFAMILY Protein kinase-like (PK-like) 54 353 IPR011009 -
Lan8g0058 426 Gene3D Phosphorylase Kinase; domain 1 46 157 - -
Lan8g0058 426 ProSiteProfiles Protein kinase domain profile. 72 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0058 Lan-Chr8 797686 802453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0058 1 413 Glycoside Hydrolase AT3G07070 41.315 4.60e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan8g0058 PK_Tyr_Ser-Thr 6.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0058 - - cam:101511022 639.802